prot_Ecto-sp13_S_contig9676.21307.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9676.21307.1
Unique Nameprot_Ecto-sp13_S_contig9676.21307.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9676.21307.1 vs. uniprot
Match: D8LM15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM15_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 6.240e-40
Identity = 64/68 (94.12%), Postives = 65/68 (95.59%), Query Frame = 0 
Query:    1 MSHSELSLPKASVWNLTAPAISGNVKLDTVILVPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
            MS S LSLPKASVWNLTAPA+SGNVKLDTVIL PRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA
Sbjct:    1 MSQSALSLPKASVWNLTAPAMSGNVKLDTVILAPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
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BLAST of mRNA_Ecto-sp13_S_contig9676.21307.1 vs. uniprot
Match: A0A6H5KL14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL14_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 2.970e-30
Identity = 62/110 (56.36%), Postives = 63/110 (57.27%), Query Frame = 0 
Query:    1 MSHSELSLPKASVWNLTAPAIS------------------------------------------GNVKLDTVILVPRESFMRASLNSLQTRSWMTCWRGLAGRWTPWSSA 68
            MSHS LSLPKAS WNLTAPA+S                                          GNVKLDTV L PRESFMRASLNSLQTRSWMTCWRGLA RWTPWSSA
Sbjct:    1 MSHSALSLPKASAWNLTAPALSAFQDIFMPVLAPHPARSALAGKRQRNSMLLLLLPACDFLVSAGNVKLDTVFLAPRESFMRASLNSLQTRSWMTCWRGLARRWTPWSSA 110
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9676.21307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM15_ECTSI6.240e-4094.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL14_9PHAE2.970e-3056.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9676contigEcto-sp13_S_contig9676:4956..6194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9676.21307.1mRNA_Ecto-sp13_S_contig9676.21307.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9676 4321..6214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9676.21307.1 ID=prot_Ecto-sp13_S_contig9676.21307.1|Name=mRNA_Ecto-sp13_S_contig9676.21307.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
MSHSELSLPKASVWNLTAPAISGNVKLDTVILVPRESFMRASLNSLQTRS
WMTCWRGLAGRWTPWSSA*
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