prot_Ecto-sp13_S_contig9668.21299.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9668.21299.1
Unique Nameprot_Ecto-sp13_S_contig9668.21299.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: D7FVR3_ECTSI (Dynein light chain n=2 Tax=Stramenopiles TaxID=33634 RepID=D7FVR3_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 7.840e-48
Identity = 80/90 (88.89%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEK        DIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEK--------DIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: A0A2C9K100_BIOGL (Dynein light chain n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9K100_BIOGL)

HSP 1 Score: 151 bits (382), Expect = 3.740e-46
Identity = 77/90 (85.56%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADMSEDMQQDAVDCA+QALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: C1FDC9_MICCC (Dynein light chain n=2 Tax=Eukaryota TaxID=2759 RepID=C1FDC9_MICCC)

HSP 1 Score: 151 bits (382), Expect = 3.740e-46
Identity = 77/90 (85.56%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADMSEDMQQDAVDCA+QALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: W4HCB9_9STRA (Dynein light chain n=26 Tax=Oomycota TaxID=4762 RepID=W4HCB9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.550e-46
Identity = 77/90 (85.56%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: C1ML17_MICPC (Dynein light chain n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1ML17_MICPC)

HSP 1 Score: 150 bits (379), Expect = 1.070e-45
Identity = 76/90 (84.44%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADMSED+QQDAVDCA+QALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSERKAVIKNADMSEDLQQDAVDCATQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: A0A7L9QEK2_9CHLO (Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID=1825957 RepID=A0A7L9QEK2_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 1.480e-45
Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADMSEDMQQDA+DCA+QALEKYN+EK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   23 MSERKAVIKNADMSEDMQQDAIDCATQALEKYNVEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 104          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: A0A485LAB0_9STRA (Dynein light chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAB0_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.140e-45
Identity = 77/90 (85.56%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   35 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 116          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: A0A401QGE4_SCYTO (Dynein light chain n=3 Tax=Chondrichthyes TaxID=7777 RepID=A0A401QGE4_SCYTO)

HSP 1 Score: 149 bits (377), Expect = 2.160e-45
Identity = 75/90 (83.33%), Postives = 80/90 (88.89%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MS+RKAVIKNADMSEDMQQDAVDCA+QA+EKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: M4BH12_HYAAE (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=M4BH12_HYAAE)

HSP 1 Score: 149 bits (377), Expect = 2.160e-45
Identity = 76/90 (84.44%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            M+ERKAVIKNADM EDMQQDAVDCASQALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:    1 MAERKAVIKNADMHEDMQQDAVDCASQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 82          
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Match: A0A6A3E1H5_9STRA (Dynein light chain n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3E1H5_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.740e-45
Identity = 77/90 (85.56%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS 90
            MSERKAVIKNADM EDMQQDAVDCASQALEKYNIEK        DIAAFIKKEFDKKY+ TWHCIVGRNFGSYVTHETKHFIYFYLGQ +
Sbjct:   43 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEK--------DIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA 124          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9668.21299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVR3_ECTSI7.840e-4888.89Dynein light chain n=2 Tax=Stramenopiles TaxID=336... [more]
A0A2C9K100_BIOGL3.740e-4685.56Dynein light chain n=4 Tax=Euthyneura TaxID=216307... [more]
C1FDC9_MICCC3.740e-4685.56Dynein light chain n=2 Tax=Eukaryota TaxID=2759 Re... [more]
W4HCB9_9STRA7.550e-4685.56Dynein light chain n=26 Tax=Oomycota TaxID=4762 Re... [more]
C1ML17_MICPC1.070e-4584.44Dynein light chain n=2 Tax=Micromonas pusilla TaxI... [more]
A0A7L9QEK2_9CHLO1.480e-4583.33Dynein light chain n=1 Tax=Trebouxia sp. TR9 TaxID... [more]
A0A485LAB0_9STRA2.140e-4585.56Dynein light chain n=1 Tax=Aphanomyces stellatus T... [more]
A0A401QGE4_SCYTO2.160e-4583.33Dynein light chain n=3 Tax=Chondrichthyes TaxID=77... [more]
M4BH12_HYAAE2.160e-4584.44Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re... [more]
A0A6A3E1H5_9STRA2.740e-4585.56Dynein light chain n=2 Tax=Phytophthora TaxID=4783... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..89
e-value: 3.2E-47
score: 172.9
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 5..88
e-value: 2.5E-37
score: 127.1
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 1..89
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..90
e-value: 3.7E-40
score: 137.9
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 1..89
NoneNo IPR availablePANTHERPTHR11886:SF62DYNEIN LIGHT CHAINcoord: 1..89
IPR019763Dynein light chain, type 1/2, conserved sitePROSITEPS01239DYNEIN_LIGHT_1coord: 63..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9668contigEcto-sp13_S_contig9668:1048..2361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9668.21299.1mRNA_Ecto-sp13_S_contig9668.21299.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9668 1048..2361 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9668.21299.1 ID=prot_Ecto-sp13_S_contig9668.21299.1|Name=mRNA_Ecto-sp13_S_contig9668.21299.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKASSLPCHSDIAAFI
KKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001372Dynein_light_chain_typ-1/2
IPR037177DLC_sf
IPR019763Dynein_light_1/2_CS