prot_Ecto-sp13_S_contig9665.21297.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9665.21297.1
Unique Nameprot_Ecto-sp13_S_contig9665.21297.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length192
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9665.21297.1 vs. uniprot
Match: A0A6H5KW90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW90_9PHAE)

HSP 1 Score: 321 bits (823), Expect = 3.870e-110
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0 
Query:    1 MGEPSQQQGLWFWRDSCINVANNSDYKVSYWVEQECKMKTRAVQETVVSTMDTKLNGKAKIGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAEVRAAKRAKTEKTVCTEKTEMVSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSVNGRKREYTLTALNANIKPYI 191
            M EPSQQQGLWFWRDSCINVANNSDYKVSYWVEQECKMKTRAVQETVVSTMDTKLNGKAKIGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAEVRAAKRAKTEKTVCTEKTE VSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYS+NGRKREYTLTALN NIKPYI
Sbjct:    1 MEEPSQQQGLWFWRDSCINVANNSDYKVSYWVEQECKMKTRAVQETVVSTMDTKLNGKAKIGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAEVRAAKRAKTEKTVCTEKTE-VSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSINGRKREYTLTALNVNIKPYI 190
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BLAST of mRNA_Ecto-sp13_S_contig9665.21297.1 vs. uniprot
Match: D8LS15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS15_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 2.960e-66
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0 
Query:   93 PGAEVRAAKRAKTEKTVCTEKTEMVSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSVNGRKREYTLTALNANIKPYI 191
            PGAEVRAAKRAKTEKTVCTEKTEMVSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSVNGRKREYTLTALNANIKPYI
Sbjct:   10 PGAEVRAAKRAKTEKTVCTEKTEMVSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVYSVNGRKREYTLTALNANIKPYI 108
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9665.21297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW90_9PHAE3.870e-11097.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS15_ECTSI2.960e-66100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9665contigEcto-sp13_S_contig9665:66..3371 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9665.21297.1mRNA_Ecto-sp13_S_contig9665.21297.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9665 2..3549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9665.21297.1 ID=prot_Ecto-sp13_S_contig9665.21297.1|Name=mRNA_Ecto-sp13_S_contig9665.21297.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=192bp
MGEPSQQQGLWFWRDSCINVANNSDYKVSYWVEQECKMKTRAVQETVVST
MDTKLNGKAKIGDDGGEEDSEGGGGGGGGVVSAMMGGGGGGGPGAEVRAA
KRAKTEKTVCTEKTEMVSYFLMKDHRMEPRRGTPPTTVYFPEGCKNLRVY
AFFQAKDGQTWKSYKDKVYSVNGRKREYTLTALNANIKPYI*
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