prot_Ecto-sp13_S_contig9664.21296.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9664.21296.1
Unique Nameprot_Ecto-sp13_S_contig9664.21296.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length295
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9664.21296.1 vs. uniprot
Match: D8LIG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG4_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 3.510e-115
Identity = 244/294 (82.99%), Postives = 248/294 (84.35%), Query Frame = 0 
Query:    1 MEDCCNEAAAKNQAGAAELATRRAAARRAKATKVSMEVKCREQAQLNQLTVEHSKTAKAEEEARSAELREKFETAVPNIQEKLKVEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPVSLRVEIAKAKCEQQEAERKAADARADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILNERKAMSAGLEAKTKELLASRASMEADCAVLREVVASEESLLRAASNSGVKDGHRTLQRSLSLCPVHQAAKSHKKMAERLQGLCSQLELEVASSRLGLVAFQADPALLG 294
            MEDCCNEAAAKNQAGAAELATRRAAARRAK TK+SMEVKCREQAQLNQLTVEHSKTAKA EEARSAELREKFETAVP+IQEKLK+EAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTP SLRVEIA AKCEQQEAERKAAD    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      AMSAGLEAKTKELLASRASMEA+CAVLREVVASEE                             AAKSHKKMAERLQGLCSQLELEVASSRLGL  FQADPAL G
Sbjct:   52 MEDCCNEAAAKNQAGAAELATRRAAARRAKVTKLSMEVKCREQAQLNQLTVEHSKTAKAGEEARSAELREKFETAVPSIQEKLKLEAERRRQQRLDNDELRAKLISFAEQTRLSKEACAAQLTPASLRVEIASAKCEQQEAERKAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMSAGLEAKTKELLASRASMEAECAVLREVVASEE-----------------------------AAKSHKKMAERLQGLCSQLELEVASSRLGLAVFQADPALRG 316
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9664.21296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIG4_ECTSI3.510e-11582.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 129..170
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availablePANTHERPTHR16127:SF13ALPHA-TAXILIN-LIKE PROTEINcoord: 5..169
IPR026183Taxilin familyPFAMPF09728Taxilincoord: 11..173
e-value: 1.9E-10
score: 40.4
IPR026183Taxilin familyPANTHERPTHR16127TAXILINcoord: 5..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9664contigEcto-sp13_S_contig9664:661..5101 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9664.21296.1mRNA_Ecto-sp13_S_contig9664.21296.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9664 555..5304 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9664.21296.1 ID=prot_Ecto-sp13_S_contig9664.21296.1|Name=mRNA_Ecto-sp13_S_contig9664.21296.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=295bp
MEDCCNEAAAKNQAGAAELATRRAAARRAKATKVSMEVKCREQAQLNQLT
VEHSKTAKAEEEARSAELREKFETAVPNIQEKLKVEAERRRQQRLDNDEL
RAKLISFAEQTRLSKEACAAQLTPVSLRVEIAKAKCEQQEAERKAADARA
DSLQVELERATASHTKLKADTTQRERSLTKIQNILNERKAMSAGLEAKTK
ELLASRASMEADCAVLREVVASEESLLRAASNSGVKDGHRTLQRSLSLCP
VHQAAKSHKKMAERLQGLCSQLELEVASSRLGLVAFQADPALLG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026183Taxilin_fam