prot_Ecto-sp13_S_contig9661.21294.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9661.21294.1
Unique Nameprot_Ecto-sp13_S_contig9661.21294.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length51
Homology
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A835ZEK6_9STRA (Cytochrome c oxidase assembly protein CtaG/Cox11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 9.250e-14
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 0
Query:    1 QVVPGETALAFFTAKNPTKKHITGVATYNVFPLKAG 36
            +VVPGETALAF+TA NPTKKHITGVATYNVFPLKAG
Sbjct:  130 RVVPGETALAFYTASNPTKKHITGVATYNVFPLKAG 165          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A3S2TP52_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2TP52_CHISP)

HSP 1 Score: 65.1 bits (157), Expect = 2.290e-11
Identity = 26/37 (70.27%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            VVPGETALAF+TA+NPT+KH+TG++TYNV P +AG++
Sbjct:  132 VVPGETALAFYTARNPTQKHVTGISTYNVIPFEAGQY 168          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A1V9YAD6_9STRA (Cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YAD6_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 6.920e-11
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            +VPGETALAF+TAKNPT K ITGVATYNV+P KAG +
Sbjct:  118 IVPGETALAFYTAKNPTDKAITGVATYNVYPPKAGLY 154          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A183QFP8_9TREM (Uncharacterized protein n=1 Tax=Schistosoma rodhaini TaxID=6188 RepID=A0A183QFP8_9TREM)

HSP 1 Score: 62.4 bits (150), Expect = 1.280e-10
Identity = 31/56 (55.36%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 QVVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF-----PSSPAGRDLLACG 51
            ++VPGETALAF+TA+NPT K I G+ATY+V P++A K+      SSP G D+  CG
Sbjct:  128 RIVPGETALAFYTAENPTDKPIVGIATYSVLPIEASKYFHKIQKSSPQG-DVSGCG 182          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A067D8C3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D8C3_SAPPC)

HSP 1 Score: 62.8 bits (151), Expect = 1.350e-10
Identity = 29/37 (78.38%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            +VPGETALAF+TAKNPT+K ITGVATYNV P KAG +
Sbjct:  118 IVPGETALAFYTAKNPTEKAITGVATYNVHPPKAGLY 154          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: UPI001589C7AA (cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI001589C7AA)

HSP 1 Score: 61.2 bits (147), Expect = 6.420e-10
Identity = 26/38 (68.42%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 QVVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            +V+PGETALAF+TAKNPT K +TG++TYNV P  AGK+
Sbjct:  117 KVLPGETALAFYTAKNPTDKPVTGISTYNVVPFDAGKY 154          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A6I9MVU7_9TELE (cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9MVU7_9TELE)

HSP 1 Score: 60.5 bits (145), Expect = 7.190e-10
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            VVPGETALAF+ AKNPT KHI G++TYNV P  AG++
Sbjct:  142 VVPGETALAFYRAKNPTNKHIIGISTYNVVPFDAGQY 178          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: UPI00083C5200 (cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C5200)

HSP 1 Score: 60.8 bits (146), Expect = 8.500e-10
Identity = 24/37 (64.86%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            ++PGETALAF+TAKNPT K +TG++TYNV P +AG++
Sbjct:  129 IIPGETALAFYTAKNPTDKPVTGISTYNVIPFEAGQY 165          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: UPI00103E13A9 (cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103E13A9)

HSP 1 Score: 60.8 bits (146), Expect = 8.760e-10
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            VVPGETALAF+TA+NPT K +TG++TYNV P +AG++
Sbjct:  132 VVPGETALAFYTARNPTNKPVTGISTYNVIPFEAGQY 168          
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Match: A0A6J1WG33_GALME (cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J1WG33_GALME)

HSP 1 Score: 60.5 bits (145), Expect = 1.210e-9
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    2 VVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKF 38
            VVPGETALAF+TA+NPT K +TG++TYNV P +AG++
Sbjct:  130 VVPGETALAFYTARNPTDKPVTGISTYNVIPFEAGQY 166          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9661.21294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZEK6_9STRA9.250e-1491.67Cytochrome c oxidase assembly protein CtaG/Cox11-d... [more]
A0A3S2TP52_CHISP2.290e-1170.27Uncharacterized protein n=1 Tax=Chilo suppressalis... [more]
A0A1V9YAD6_9STRA6.920e-1178.38Cytochrome c oxidase assembly protein COX11, mitoc... [more]
A0A183QFP8_9TREM1.280e-1055.36Uncharacterized protein n=1 Tax=Schistosoma rodhai... [more]
A0A067D8C3_SAPPC1.350e-1078.38Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
UPI001589C7AA6.420e-1068.42cytochrome c oxidase assembly protein COX11, mitoc... [more]
A0A6I9MVU7_9TELE7.190e-1070.27cytochrome c oxidase assembly protein COX11, mitoc... [more]
UPI00083C52008.500e-1064.86cytochrome c oxidase assembly protein COX11, mitoc... [more]
UPI00103E13A98.760e-1067.57cytochrome c oxidase assembly protein COX11, mitoc... [more]
A0A6J1WG33_GALME1.210e-967.57cytochrome c oxidase assembly protein COX11, mitoc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilyGENE3D2.60.370.10coord: 1..41
e-value: 2.9E-11
score: 44.9
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilySUPERFAMILY110111Ctag/Cox11coord: 2..38
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11PFAMPF04442CtaG_Cox11coord: 1..38
e-value: 8.1E-10
score: 38.9
NoneNo IPR availablePANTHERPTHR21320:SF3CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIALcoord: 2..38
NoneNo IPR availablePANTHERPTHR21320CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATEDcoord: 2..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9661contigEcto-sp13_S_contig9661:5891..6043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9661.21294.1mRNA_Ecto-sp13_S_contig9661.21294.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9661 5891..6043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9661.21294.1 ID=prot_Ecto-sp13_S_contig9661.21294.1|Name=mRNA_Ecto-sp13_S_contig9661.21294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=51bp
QVVPGETALAFFTAKNPTKKHITGVATYNVFPLKAGKFPSSPAGRDLLAC
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023471CtaG/Cox11_dom_sf
IPR007533Cyt_c_oxidase_assmbl_CtaG