prot_Ecto-sp13_S_contig9661.21293.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9661.21293.1
Unique Nameprot_Ecto-sp13_S_contig9661.21293.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: D8LDR0_ECTSI (COX11 homolog, cytochrome c oxidase assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR0_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 5.760e-113
Identity = 178/198 (89.90%), Postives = 182/198 (91.92%), Query Frame = 0
Query:    1 MLRRAAGHSACKRLLGQPVAPRSAGSTRAISVLLAKQPKQQRAVIRASLRRCQHQQPGHSAWLGEITGSNSRVAILGAPRAASRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAGTTMFAGANFLRITQDP 198
            MLRRAAGHS CKRLLGQPVAPRSAGSTRAISVLLAK P+   AVIRASLRR QHQQPGHSAWL   TGS  RVA+LGAPRAASRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAGTTMFAGA F  + + P
Sbjct:    1 MLRRAAGHSTCKRLLGQPVAPRSAGSTRAISVLLAKPPQXXXAVIRASLRRRQHQQPGHSAWLRGTTGSTCRVAVLGAPRAASRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAGTTMFAGAIFFVLHETP 198          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A6H5L0W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W6_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 5.740e-105
Identity = 168/185 (90.81%), Postives = 173/185 (93.51%), Query Frame = 0
Query:    1 MLRRAAGHSACKRLLGQPVAPRSAGSTRAISVLLAKQPKQQRAVIRASLRRCQHQQPGHSAWLGEITGSNSRVAILGAPRAASRSISA---GRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAG 182
            ML+RAA HS CKRLLGQPVAPRSAGSTRAISVLLA QPKQQ AVIRASLRR QHQQPGHSAWL  +TGS SR+++LGAPRAASRSISA   GRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADA KALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAG
Sbjct:    1 MLKRAASHSTCKRLLGQPVAPRSAGSTRAISVLLANQPKQQHAVIRASLRRRQHQQPGHSAWLRGMTGSTSRISVLGAPRAASRSISAAAAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADAGKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAG 185          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A7R9U5I8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5I8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.240e-27
Identity = 55/96 (57.29%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   94 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK--AGTTMFA 187
            LK +N +VA+Y++SVV A +G+ YAAVPLYK FCQ+TGFGGTTQ  D   A K+ PVE GR++R+TF G TA T+PW F P Q  V+  AG T  A
Sbjct:   20 LKRQNERVALYLSSVVIAFIGLGYAAVPLYKAFCQLTGFGGTTQRVDEKTAEKVKPVEDGRLLRITFAGNTASTLPWSFNPLQRSVRVVAGETALA 115          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A835ZEK6_9STRA (Cytochrome c oxidase assembly protein CtaG/Cox11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK6_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.550e-27
Identity = 57/87 (65.52%), Postives = 67/87 (77.01%), Query Frame = 0
Query:   94 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK 180
            L+ RNRK+A+YM SVV  V GVSYAAVPLYK FCQ TGFGGTTQVA  +K  +M P+   R+I VTFDG  ADTMPW+FR +QS V+
Sbjct:   44 LRERNRKIAMYMLSVVVGVGGVSYAAVPLYKAFCQATGFGGTTQVATREKTDRMVPLADSRLITVTFDGMVADTMPWRFRQSQSAVR 130          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A482RTI3_9ARCH (Cytochrome c oxidase assembly protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTI3_9ARCH)

HSP 1 Score: 109 bits (273), Expect = 4.070e-26
Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0
Query:   95 KARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK 180
            K+ N+KVA Y+ +    V G+SYAAVPLYKVFCQ+TGFGGTTQVA+   A K+SP+E GR++++ F     DTMPW F+PTQ +V+
Sbjct:   40 KSDNKKVAYYLGAATVLVFGLSYAAVPLYKVFCQMTGFGGTTQVAEESSAKKISPIENGRILKIYFTASVHDTMPWSFKPTQREVR 125          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A1V9YAD6_9STRA (Cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YAD6_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.990e-25
Identity = 50/86 (58.14%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   94 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDV 179
            L  +N+++ +Y AS      G +YAAVPLYK+FCQ+TGFGGTTQ +D   A K+SPVEG + IRVTFDGG A +MPW FRP Q D+
Sbjct:   31 LDEKNKRILMYTASTALLFFGAAYAAVPLYKIFCQMTGFGGTTQRSDMLTAEKLSPVEGAKPIRVTFDGGVASSMPWSFRPIQRDL 116          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: F0XYP1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP1_AURAN)

HSP 1 Score: 105 bits (262), Expect = 4.430e-25
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0
Query:   97 RNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKM-SPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK 180
            RN +V +Y  SVV + LG+ YA+VPLYKVFCQ TGFGGTT+ AD ++A ++ +PVEGGRV+RVTFD   +D++PW F P Q DV+
Sbjct:    2 RNTRVLLYGCSVVVSTLGLCYASVPLYKVFCQTTGFGGTTKRADPEEAARLLAPVEGGRVLRVTFDAHVSDSLPWSFAPAQRDVR 86          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A067D8C3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D8C3_SAPPC)

HSP 1 Score: 105 bits (262), Expect = 1.110e-24
Identity = 50/86 (58.14%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   94 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDV 179
            L  +N+++ +Y AS      G +YAAVPLYK+FCQ+TGFGGTTQ +D   A K+SPVEG   IRVTFDGG A  MPW FRP Q D+
Sbjct:   31 LDEKNKRIMLYTASTALLFFGAAYAAVPLYKIFCQMTGFGGTTQRSDILTAEKLSPVEGAHPIRVTFDGGVAGAMPWSFRPIQRDL 116          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A6G0WXN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXN5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.190e-24
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   93 ELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDV 179
            +LK +N+++  Y + V+    G +YAAVPLYKVFCQ+TGFGGTTQ +D  +A K+SPVEG   IR+TFDGG    MPW F+P Q D+
Sbjct:   33 QLKDKNKRILYYTSGVILMCFGAAYAAVPLYKVFCQMTGFGGTTQRSDILRAEKLSPVEGAHPIRITFDGGVGGAMPWAFKPVQRDL 119          
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Match: A0A024UCT1_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UCT1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.470e-24
Identity = 53/97 (54.64%), Postives = 66/97 (68.04%), Query Frame = 0
Query:   83 SRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDV 179
            S S  A  A +L+ +NR++  Y + VV    G +YAAVPLYKVFCQ+TGFGGTTQ +D   A K+SPVEG   IR+TFDGG    MPW F+P Q D+
Sbjct:   25 SMSSKAAYAKQLQEKNRRILYYTSGVVILFFGGAYAAVPLYKVFCQMTGFGGTTQRSDILAAEKLSPVEGAHPIRITFDGGVGGAMPWTFKPVQRDL 121          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9661.21293.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR0_ECTSI5.760e-11389.90COX11 homolog, cytochrome c oxidase assembly prote... [more]
A0A6H5L0W6_9PHAE5.740e-10590.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9U5I8_9STRA2.240e-2757.29Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A835ZEK6_9STRA2.550e-2765.52Cytochrome c oxidase assembly protein CtaG/Cox11-d... [more]
A0A482RTI3_9ARCH4.070e-2656.98Cytochrome c oxidase assembly protein n=1 Tax=arch... [more]
A0A1V9YAD6_9STRA3.990e-2558.14Cytochrome c oxidase assembly protein COX11, mitoc... [more]
F0XYP1_AURAN4.430e-2558.82Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A067D8C3_SAPPC1.110e-2458.14Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A6G0WXN5_9STRA1.190e-2455.17Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UCT1_9STRA2.470e-2454.64Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11PFAMPF04442CtaG_Cox11coord: 119..181
e-value: 4.5E-14
score: 52.7
NoneNo IPR availablePANTHERPTHR21320CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATEDcoord: 57..180
NoneNo IPR availablePANTHERPTHR21320:SF3CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIALcoord: 57..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 101..120
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 121..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..100
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilySUPERFAMILY110111Ctag/Cox11coord: 148..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9661contigEcto-sp13_S_contig9661:3077..5559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9661.21293.1mRNA_Ecto-sp13_S_contig9661.21293.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9661 3077..5559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9661.21293.1 ID=prot_Ecto-sp13_S_contig9661.21293.1|Name=mRNA_Ecto-sp13_S_contig9661.21293.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MLRRAAGHSACKRLLGQPVAPRSAGSTRAISVLLAKQPKQQRAVIRASLR
RCQHQQPGHSAWLGEITGSNSRVAILGAPRAASRSISAGRAAELKARNRK
VAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPV
EGGRVIRVTFDGGTADTMPWKFRPTQSDVKAGTTMFAGANFLRITQDPPS
KT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007533Cyt_c_oxidase_assmbl_CtaG
IPR023471CtaG/Cox11_dom_sf