prot_Ecto-sp13_S_contig9654.21283.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9654.21283.1
Unique Nameprot_Ecto-sp13_S_contig9654.21283.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length58
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9654.21283.1 vs. uniprot
Match: D7FX07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX07_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 5.380e-6
Identity = 22/28 (78.57%), Postives = 26/28 (92.86%), Query Frame = 0 
Query:   31 TPDILTQAANTDMHMSMHHDRIRSTKVE 58
            TP++  +AANTDMHMSMHHDRI+STKVE
Sbjct:  131 TPEVQRKAANTDMHMSMHHDRIKSTKVE 158
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BLAST of mRNA_Ecto-sp13_S_contig9654.21283.1 vs. uniprot
Match: A0A6H5KZI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI7_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 5.860e-6
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:   23 NPTLEKNCTPDILTQAANTDMHMSMHHDRIRSTKVE 58
            NP+L+   TPDILTQAAN DM MS+ HDRI+S KVE
Sbjct:    3 NPSLQTK-TPDILTQAANMDMQMSIQHDRIKSAKVE 37
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BLAST of mRNA_Ecto-sp13_S_contig9654.21283.1 vs. uniprot
Match: D8LGI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGI8_ECTSI)

HSP 1 Score: 47.4 bits (111), Expect = 9.800e-5
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0 
Query:   19 TAKTNPTLEKNCTPDILTQAANTDMHMSMHHDRIRSTKVE 58
            TA+T+ T  +N T +ILTQAAN DM MS+ HDRI+S KVE
Sbjct:   37 TAQTSDT--RNATQNILTQAANMDMQMSIQHDRIKSAKVE 74
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9654.21283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX07_ECTSI5.380e-678.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KZI7_9PHAE5.860e-669.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGI8_ECTSI9.800e-562.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..58
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.549

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9654contigEcto-sp13_S_contig9654:1982..2155 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9654.21283.1mRNA_Ecto-sp13_S_contig9654.21283.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9654 1007..2155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9654.21283.1 ID=prot_Ecto-sp13_S_contig9654.21283.1|Name=mRNA_Ecto-sp13_S_contig9654.21283.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=58bp
MLFIMMVQLHCLTRSFGLTAKTNPTLEKNCTPDILTQAANTDMHMSMHHD
RIRSTKVE
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