prot_Ecto-sp13_S_contig9648.21276.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9648.21276.1
Unique Nameprot_Ecto-sp13_S_contig9648.21276.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length121
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9648.21276.1 vs. uniprot
Match: A0A6H5JMU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMU9_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 3.800e-8
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0 
Query:    1 PVINHDKSADRWRLELNFTPKK-KKTARKRSAWYPTREEAEASASWWRLSWEQGNNGKKINPGTQPDEPRRNSSRSSPADVELPPGKSERSIGRLNRVQELQFKRQRKEGSSLSR 114
            PV   +K+  +WRL LNFT +K  K  R++S+ + +RE A A    +R+ WE  + GK      +   P   SS +  A   LP GKS+  +G+LN V+E  FKRQR  GS  +R
Sbjct:   19 PVCYPEKNTGKWRLFLNFTKRKGDKAKRQQSSRFASREAALAGVLDFRIGWEYSHRGKLYKRTMRDPVP---SSAAVAAATALPAGKSQIGLGKLNAVEERNFKRQRLAGSDATR 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9648.21276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMU9_9PHAE3.800e-839.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9648contigEcto-sp13_S_contig9648:4901..5998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9648.21276.1mRNA_Ecto-sp13_S_contig9648.21276.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9648 4901..5998 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9648.21276.1 ID=prot_Ecto-sp13_S_contig9648.21276.1|Name=mRNA_Ecto-sp13_S_contig9648.21276.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=121bp
PVINHDKSADRWRLELNFTPKKKKTARKRSAWYPTREEAEASASWWRLSW
EQGNNGKKINPGTQPDEPRRNSSRSSPADVELPPGKSERSIGRLNRVQEL
QFKRQRKEGSSLSRGEWMKSN
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