prot_Ecto-sp13_S_contig9647.21275.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9647.21275.1
Unique Nameprot_Ecto-sp13_S_contig9647.21275.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length135
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9647.21275.1 vs. uniprot
Match: A0A6H5JP29_9PHAE (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP29_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.250e-48
Identity = 102/135 (75.56%), Postives = 108/135 (80.00%), Query Frame = 0 
Query:    1 STRHDPGAESDAVLLQELDRCIMWHWESKEHKRREARNIAGRGREQKTADQTGEVKTTAVASDGAGNEEDRKQPQERPASSSVATANSISRGVGGXXXXXXWYRSNESRVHRPPLSPPPSKRPFEQALEALERLT 135
            STR  PGA+SDAVLL+ELDRCIMW+WESKEHKRREARNI  RGREQK ADQ  E   TAVASDG G+E+D KQPQERPASSSV  A         XXXXX  YRS ESRVHRPPLSPP SKRPFE+ALEALERLT
Sbjct: 2556 STRPGPGADSDAVLLRELDRCIMWYWESKEHKRREARNIEERGREQKLADQAVEANVTAVASDGDGDEKDCKQPQERPASSSVKIAXXXXXXXXXXXXXXADYRSKESRVHRPPLSPPSSKRPFERALEALERLT 2690
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BLAST of mRNA_Ecto-sp13_S_contig9647.21275.1 vs. uniprot
Match: D8LLD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLD5_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.390e-28
Identity = 73/113 (64.60%), Postives = 75/113 (66.37%), Query Frame = 0 
Query:   23 MWHWESKEHKRREARNIAGRGREQKTADQTGEVKTTAVASDGAGNEEDRKQPQERPASSSVATANSISRGVGGXXXXXXWYRSNESRVHRPPLSPPPSKRPFEQALEALERLT 135
            MWHWESKEH+RREARNI GRGRE K ADQ GEVKTTAVASDG G+                            XXXXX  YRSNESRVHRPPLSPP SKRPF QALE LERLT
Sbjct:    1 MWHWESKEHERREARNIEGRGREHKIADQAGEVKTTAVASDGDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASYRSNESRVHRPPLSPPSSKRPFVQALETLERLT 113
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9647.21275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP29_9PHAE4.250e-4875.56AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
D8LLD5_ECTSI1.390e-2864.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9647contigEcto-sp13_S_contig9647:4068..5460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9647.21275.1mRNA_Ecto-sp13_S_contig9647.21275.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9647 4066..5460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9647.21275.1 ID=prot_Ecto-sp13_S_contig9647.21275.1|Name=mRNA_Ecto-sp13_S_contig9647.21275.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=135bp
STRHDPGAESDAVLLQELDRCIMWHWESKEHKRREARNIAGRGREQKTAD
QTGEVKTTAVASDGAGNEEDRKQPQERPASSSVATANSISRGVGGAGGGG
GWYRSNESRVHRPPLSPPPSKRPFEQALEALERLT
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