prot_Ecto-sp13_S_contig9640.21270.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9640.21270.1
Unique Nameprot_Ecto-sp13_S_contig9640.21270.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A6H5JMF4_9PHAE (Vps8 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.660e-20
Identity = 65/117 (55.56%), Postives = 67/117 (57.26%), Query Frame = 0
Query:    1 TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTL-----------------------------------------------SARLASLRTALQTASLRELAAEMAL 70
            ++S  YSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTL                                               SARLASLRTALQ ASLRELAAEMAL
Sbjct: 1874 SSSTGYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLQNLGRAAGRGGGGXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSARLASLRTALQKASLRELAAEMAL 1990          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: B8CD47_THAPS (Vps8 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD47_THAPS)

HSP 1 Score: 63.2 bits (152), Expect = 5.980e-10
Identity = 31/57 (54.39%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQ 57
            + ++ Y LDD L LCQ+R + DA+AYLLER GDV GAL L L+TL +R+ +L++ LQ
Sbjct:  536 STNHNYRLDDALKLCQDRRITDASAYLLERMGDVSGALQLMLQTLDSRMITLKSILQ 592          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A7S2PNM9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PNM9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 7.380e-9
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    1 TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLR 53
            + +  Y L D L LCQ+R +ADA+AYLLER GDV GAL L L+TL  RL +LR
Sbjct:  930 STNQSYRLKDALELCQKRKIADASAYLLERMGDVSGALQLMLQTLDTRLVTLR 982          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: K0RHT5_THAOC (Vps8 domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RHT5_THAOC)

HSP 1 Score: 56.2 bits (134), Expect = 1.690e-7
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQT 58
            T  N Y LD+ L  CQ+  +ADA+AYLLER GD+ G+L L L +L  RL + + ALQ+
Sbjct: 1196 THQNNYRLDEALKQCQDCEIADASAYLLERLGDISGSLKLMLESLDERLRNFKLALQS 1253          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A1E1XA93_9ACAR (Putative vacuolar assembly/sorting protein vps8 (Fragment) n=1 Tax=Amblyomma aureolatum TaxID=187763 RepID=A0A1E1XA93_9ACAR)

HSP 1 Score: 55.5 bits (132), Expect = 3.150e-7
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    1 TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARL 49
            + S  Y +++TLA+C+   V DATAYLLE+ GDV GALA+ L+ LS RL
Sbjct: 1004 STSEGYRIEETLAICRRHSVLDATAYLLEKAGDVQGALAIMLQCLSQRL 1052          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: D8LRX0_ECTSI (Vps8 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 4.330e-7
Identity = 27/32 (84.38%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    5 RYSLDDTLALCQERGVADATAYLLERKGDVPG 36
            RYS DDTLALCQERGVA AT YLLERKG  PG
Sbjct: 1693 RYSPDDTLALCQERGVAHATPYLLERKGRRPG 1724          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A1S3HLZ8_LINUN (vacuolar protein sorting-associated protein 8 homolog isoform X1 n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HLZ8_LINUN)

HSP 1 Score: 54.3 bits (129), Expect = 8.060e-7
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 ASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQT 58
            A+  Y L++TL LC++  V+DATA+LLE+KGDV GA  + L TL ARL  ++  L++
Sbjct: 1028 AAEGYRLEETLELCRKYKVSDATAFLLEKKGDVQGAFNINLETLQARLKDIQELLKS 1084          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A662WX84_9STRA (Chromo domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WX84_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.840e-6
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    6 YSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQ 57
            Y +D  L LC+E G+ DA AYLLER GDV GAL L L++L  +L  L+ AL+
Sbjct: 1662 YKVDACLRLCKEFGITDAEAYLLERTGDVTGALTLILQSLEQKLKILKPALR 1713          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A397EVL7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EVL7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.410e-6
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    2 ASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQ 57
            A   Y +D  L LC+E  + DA AYLLER GDV GAL+L L +L  ++  LR AL+
Sbjct:  170 AHQAYRVDSCLKLCKEYNITDAEAYLLERTGDVTGALSLILTSLEKKIGLLRPALR 225          
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Match: A0A418DMG7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418DMG7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.670e-6
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    2 ASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLASLRTALQ 57
            A   Y +D  L LC+E  + DA AYLLER GDV GAL+L L +L  ++  LR AL+
Sbjct:  247 AHQAYRVDSCLKLCKEYSITDAEAYLLERTGDVTGALSLILTSLEKKIGLLRPALR 302          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9640.21270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JMF4_9PHAE1.660e-2055.56Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
B8CD47_THAPS5.980e-1054.39Vps8 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7S2PNM9_9STRA7.380e-958.49Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0RHT5_THAOC1.690e-750.00Vps8 domain-containing protein (Fragment) n=1 Tax=... [more]
A0A1E1XA93_9ACAR3.150e-755.10Putative vacuolar assembly/sorting protein vps8 (F... [more]
D8LRX0_ECTSI4.330e-784.38Vps8 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A1S3HLZ8_LINUN8.060e-749.12vacuolar protein sorting-associated protein 8 homo... [more]
A0A662WX84_9STRA2.840e-653.85Chromo domain-containing protein n=2 Tax=Nothophyt... [more]
A0A397EVL7_9STRA3.410e-650.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A418DMG7_9STRA3.670e-650.00Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12616VACUOLAR PROTEIN SORTING VPS41coord: 3..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9640contigEcto-sp13_S_contig9640:5770..5982 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9640.21270.1mRNA_Ecto-sp13_S_contig9640.21270.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9640 5770..5982 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9640.21270.1 ID=prot_Ecto-sp13_S_contig9640.21270.1|Name=mRNA_Ecto-sp13_S_contig9640.21270.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=71bp
TASNRYSLDDTLALCQERGVADATAYLLERKGDVPGALALALRTLSARLA
SLRTALQTASLRELAAEMALL
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