prot_Ecto-sp13_S_contig964.21268.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig964.21268.1
Unique Nameprot_Ecto-sp13_S_contig964.21268.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length869
Homology
BLAST of mRNA_Ecto-sp13_S_contig964.21268.1 vs. uniprot
Match: A0A6H5L596_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L596_9PHAE)

HSP 1 Score: 541 bits (1394), Expect = 1.050e-177
Identity = 440/598 (73.58%), Postives = 451/598 (75.42%), Query Frame = 0
Query:   16 MAKPEFTVGKNMDHPHLKGRFTLRIWIPVEQTAMVIGKCGQIKQELGVKSIDCPVAPPGLLWSPVVVTGDPTSSFKAFKAIAEIVE-----EVDTAAVAEFPLHLSRHPIVVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXSLRDKNLVVQLEGDVEAVFSSLAMIMEAVYGCPASTLVGALRPPSNSLAAPXXXXXXXXXXXRRSAVPPGEPAALASSESPARGGGADRTSREGMRHTMVPDAQQRGVPQGVGLSHAPAXXXXXXXXXXXXXXXXXXX--------NKRQQPAKQQPGQGHARPPATGMGTPSPAQQGADTRGKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSPRTTNNTQWPTPPRQAGEAMSEESPKQXXXXXXXXXXXSQGQIVVPIPGPLPSAERSEETVRLPASVIPVLKGQAKSKSGNGLVVARWLILKDIQKHTGTTATAISVPRAGADGGRAGTGKANAPATKTTSENXXXXXXXXXXXXXXDGDADEDLVLLVKGPTNCVEVAVEALRKLGRKETVRDALTFVKTTSPHRRLTQ 600
            MAKPEFTVGKNMDHPHLKGRFTLRIWIPVEQTAMVIGKCGQIKQELGVKSIDCPVAPPGLLWSPVV+TGDPTSSFKA+KAIAEIVE     +VDTAAVAEFPLHLSRHPI+VGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXSLRDKNLVVQ+ G                                                                               EGMRHTMV +AQ RGVPQ VG SHAPA XXXXXXXXXXXXXXXXXX        NKRQQPAKQ+PGQGH+RPP T +GTPSPAQQG   RGKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           NTQWPTPPRQAGEAM EESPKQ XXXXX      QGQ+V+PIPGPLPS ERSEETVRLPASVIPVLKGQAKSK GNGLVVARWLILKDIQKHTGT ATAISVPRAGADGGR GT              XXXXXXXXXXXXXX     EDLVLLVKGPTNCVEVA EALRKLGRKETVRDALTFVK TSPHRRLTQ
Sbjct:    1 MAKPEFTVGKNMDHPHLKGRFTLRIWIPVEQTAMVIGKCGQIKQELGVKSIDCPVAPPGLLWSPVVITGDPTSSFKAYKAIAEIVEGAICLQVDTAAVAEFPLHLSRHPIIVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXSLRDKNLVVQVRG-------------------------------------------------------------------------------EGMRHTMVTEAQ-RGVPQAVGWSHAPAAXXXXXXXXXXXXXXXXXXXXXXXTVANKRQQPAKQEPGQGHSRPPPTEIGTPSPAQQGTGARGKRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------NTQWPTPPRQAGEAMPEESPKQQXXXXX------QGQMVIPIPGPLPSTERSEETVRLPASVIPVLKGQAKSKPGNGLVVARWLILKDIQKHTGTRATAISVPRAGADGGRGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKKTSPHRRLTQ 501          
BLAST of mRNA_Ecto-sp13_S_contig964.21268.1 vs. uniprot
Match: D7FXL9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL9_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 6.720e-73
Identity = 136/158 (86.08%), Postives = 138/158 (87.34%), Query Frame = 0
Query:  443 IVVPIPGPLPSAERSEETVRLPASVIPVLKGQAKSKSGNGLVVARWLILKDIQKHTGTTATAISVPRAGADGGRAGTGKANAPATKTTSENXXXXXXXXXXXXXXDGDADEDLVLLVKGPTNCVEVAVEALRKLGRKETVRDALTFVKTTSPHRRLTQ 600
            +VVPIPGPLPSAERSEE VRLPASVIPVLKGQAKSKSGNGLVVARWLILKDIQKHTGTTATAISVPRAGAD GRAGTGKANA ATK T E+              DGDADEDLVLLVKGPTNCVEVA EALRKLGRKETVRDALTFVKTTSPHRRLTQ
Sbjct:    1 MVVPIPGPLPSAERSEEIVRLPASVIPVLKGQAKSKSGNGLVVARWLILKDIQKHTGTTATAISVPRAGADEGRAGTGKANASATKMT-EDAAESTAEATPTAVADGDADEDLVLLVKGPTNCVEVAAEALRKLGRKETVRDALTFVKTTSPHRRLTQ 157          
BLAST of mRNA_Ecto-sp13_S_contig964.21268.1 vs. uniprot
Match: A0A7S3XJQ2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJQ2_HETAK)

HSP 1 Score: 114 bits (284), Expect = 4.840e-25
Identity = 69/188 (36.70%), Postives = 104/188 (55.32%), Query Frame = 0
Query:   25 KNMDHPHLKGRFTLRIWIPVEQTAMVIGKCGQIKQELGVKSIDCPVAPPGL---LWSPVVVTGDPTSSFKAFKAIAEIVEEVDTAAVAEFPLHLSRHPIVVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXSLRDKNLVVQLEGDVEAVFSSLAMIMEAVYG-CPASTLVGALR 208
            +++DHP ++G+FTL IW+P E+  M+IGK G +   +  +S    + PP +   LWSP+V+ GDP+ +F A+K I+++VEEVD   VAEFPL   +H  V+G  G T +R+SA + VR+ VP  +                    +    NL  QLEG V A F  L  +++  +G  PA+    A R
Sbjct:   34 EHLDHPSIRGKFTLSIWVPAEKCGMIIGKRGAMITHIQRESNTKLIIPPQIEESLWSPIVIKGDPSGTFGAYKLISDLVEEVDDC-VAEFPLPPKKHAAVIGRAGMTARRLSADDGVRVHVPGRR-----------------GDPAPATPNL--QLEGPVAATFRCLGAVLDVAWGPLPAAAAAPAAR 201          
BLAST of mRNA_Ecto-sp13_S_contig964.21268.1 vs. uniprot
Match: A0A7S2GUZ9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GUZ9_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.890e-19
Identity = 62/169 (36.69%), Postives = 93/169 (55.03%), Query Frame = 0
Query:   35 RFTLRIWIPVEQTAMVIGK----CGQIKQELGVKSIDCPVAPPG--LLWSPVVVTGDPTSSFKAFKAIAEIVEEVDTAAVAEFPLHLSRHPIVVGPKGATLKRISAANAVRITVPSEKEAXXXXXXXXXXXXXXXXXXSLRDKNLVVQLEGDVEAVFSSLAMIMEAVYG 197
            RF++ +W+P EQ  MVIGK     G I++E        P    G   LW+PV + G P S+  A   + ++V+E+D A VAEF L  +RH +++GPKG+T++R+SA + VRI VPS+++                   S    N ++ LEG V  VFS L+ ++E  YG
Sbjct:   51 RFSITLWVPDEQVGMVIGKGGNMIGHIRRETNTTIQILPQTDDGEKSLWAPVSIRGHPNSARAAISMVVKLVDEIDDA-VAEFHLERTRHALIIGPKGSTIRRLSADSQVRIHVPSKRDTS-----------------SEGPPNNLISLEGSVPNVFSCLSSLLEVCYG 201          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig964.21268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L596_9PHAE1.050e-17773.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXL9_ECTSI6.720e-7386.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XJQ2_HETAK4.840e-2536.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2GUZ9_9STRA8.890e-1936.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 595..623
NoneNo IPR availableGENE3D3.30.310.210coord: 34..200
e-value: 1.8E-8
score: 36.3
NoneNo IPR availablePANTHERPTHR14312FAMILY NOT NAMEDcoord: 422..705
NoneNo IPR availablePANTHERPTHR14312:SF1CREB/ATF BZIP TRANSCRIPTION FACTORcoord: 148..420
coord: 422..705
NoneNo IPR availablePANTHERPTHR14312FAMILY NOT NAMEDcoord: 148..420
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 106..191
score: 8.387
IPR004087K Homology domainSMARTSM00322kh_6coord: 105..196
e-value: 6.9E-6
score: 35.6
coord: 34..101
e-value: 0.85
score: 16.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 110..201
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 28..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig964contigEcto-sp13_S_contig964:12441..19416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig964.21268.1mRNA_Ecto-sp13_S_contig964.21268.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig964 12441..19416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig964.21268.1 ID=prot_Ecto-sp13_S_contig964.21268.1|Name=mRNA_Ecto-sp13_S_contig964.21268.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=869bp
VRGRREREGGKSCGAMAKPEFTVGKNMDHPHLKGRFTLRIWIPVEQTAMV
IGKCGQIKQELGVKSIDCPVAPPGLLWSPVVVTGDPTSSFKAFKAIAEIV
EEVDTAAVAEFPLHLSRHPIVVGPKGATLKRISAANAVRITVPSEKEAAA
QQQQQHGWPSSSSSSSSLRDKNLVVQLEGDVEAVFSSLAMIMEAVYGCPA
STLVGALRPPSNSLAAPPAAATNAADEPRRSAVPPGEPAALASSESPARG
GGADRTSREGMRHTMVPDAQQRGVPQGVGLSHAPAAAAAAATTSTTSKTA
TTVANKRQQPAKQQPGQGHARPPATGMGTPSPAQQGADTRGKRQQQQQQQ
QQQQQQPQPQTTTKAAAAPGGGGQAIAAAAINSVTRGAAGGRAQQQRTGS
PRTTNNTQWPTPPRQAGEAMSEESPKQQQQQQQQQQQQSQGQIVVPIPGP
LPSAERSEETVRLPASVIPVLKGQAKSKSGNGLVVARWLILKDIQKHTGT
TATAISVPRAGADGGRAGTGKANAPATKTTSENAAESTAEATPTAVADGD
ADEDLVLLVKGPTNCVEVAVEALRKLGRKETVRDALTFVKTTSPHRRLTQ
QRRQEQQQQQQQQQQQQQQQRSDTNGSSTVARAQQRDGRNGGHDQSSSGS
SSNNNSRGSTSTAEARLREPDARRDGGGRAPHHPTRQVYSAAAAAAAASS
SPRKSATTREQGGGRGGGAPPPKHGHNSGGGNKPLQGEQTGGSQQAGGDG
GRNGGREAGRGGRGGRGRGHHSVHESKPQPRAPSHDAQQQQGEGAGGVQS
AATKASNKPSRQKRSGSSRGGGGRSKAGGGAPPQPAPAASGEGGQGKGRG
GSTAKGRGIAPPAAPSQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf