prot_Ecto-sp13_S_contig9634.21259.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9634.21259.1
Unique Nameprot_Ecto-sp13_S_contig9634.21259.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length153
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9634.21259.1 vs. uniprot
Match: D8LL04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL04_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 9.690e-16
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:    1 MQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNERL 47
            MQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNER+
Sbjct:   90 MQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNERM 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9634.21259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL04_ECTSI9.690e-1697.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..53
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 100..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9634contigEcto-sp13_S_contig9634:2400..4590 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9634.21259.1mRNA_Ecto-sp13_S_contig9634.21259.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9634 1688..5013 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9634.21259.1 ID=prot_Ecto-sp13_S_contig9634.21259.1|Name=mRNA_Ecto-sp13_S_contig9634.21259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=153bp
MQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNERLEKL
QVEHGVSMSRCTTLEDENALSESALASLRAETESLRNMLGGREAEAVVLR
EEARKEREELMSRLLKDKERYSIPLPSKGQKDVQHSFVEVCRTERTHQID
HE*
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