prot_Ecto-sp13_S_contig963.21255.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig963.21255.1
Unique Nameprot_Ecto-sp13_S_contig963.21255.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length140
Homology
BLAST of mRNA_Ecto-sp13_S_contig963.21255.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 5.500e-13
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   45 YRDFVYGYLAD-SGGTSGSPGVPLSCNCITNTSDSHTINLLEIGLSTTKGYKSSDVDISSYTARSRYLGGNSDMVNASIAMPFVHLSMEIKQGANS 139
            +R++VYG+L+D    T+ S G PLS +CITNTS++H  N L IGL  T   K  + DISSY A     G + + VN ++ MP+ HLS+E+KQ A+S
Sbjct:  203 HREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGL--TNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADS 296          
BLAST of mRNA_Ecto-sp13_S_contig963.21255.1 vs. uniprot
Match: D8LNQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ0_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 9.390e-13
Identity = 44/96 (45.83%), Postives = 63/96 (65.62%), Query Frame = 0
Query:   45 YRDFVYGYLAD-SGGTSGSPGVPLSCNCITNTSDSHTINLLEIGLSTTKGYKSSDVDISSYTARSRYLGGNSDMVNASIAMPFVHLSMEIKQGANS 139
            +R++VYG+L+D    T+ S G PLS +CITNTS++H  N L IGL+    + S D  ISSY A     G + + VN +I MP+ H+S+E+KQ A+S
Sbjct:  157 HREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMSDD--ISSYKALFTNFGVHKNTVNPNITMPYAHVSLEMKQQADS 250          
BLAST of mRNA_Ecto-sp13_S_contig963.21255.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.650e-12
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   45 YRDFVYGYLADSGGTSG-SPGVPLSCNCITNTSDSHTINLLEIGLSTTKGYKSSDVDISSYTARSRYLGGNSDMVNASIAMPFVHLSMEIKQGANS 139
            +R++VYG+L+D    +  S G PLS +CITNTS++H  N L IGL  T   K  + DISSY A     G + + VN ++ MP+ HLS+E+KQ A+S
Sbjct:  203 HREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGL--TNQNKFMEDDISSYKALFTNFGVHKNTVNPNVTMPYAHLSLEMKQQADS 296          
BLAST of mRNA_Ecto-sp13_S_contig963.21255.1 vs. uniprot
Match: A0A6H5JV19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV19_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 3.580e-12
Identity = 44/96 (45.83%), Postives = 62/96 (64.58%), Query Frame = 0
Query:   45 YRDFVYGYLAD-SGGTSGSPGVPLSCNCITNTSDSHTINLLEIGLSTTKGYKSSDVDISSYTARSRYLGGNSDMVNASIAMPFVHLSMEIKQGANS 139
            +R++VYG+L+D    T+ S G PLS +CITNTS++H  N L +GL  T   K    DISSY A     G + + VN +I MP+ H+S+E+KQ A+S
Sbjct:  197 HREWVYGFLSDPEDPTAISTGFPLSYSCITNTSNTHIFNTLGVGL--TNQIKFMSDDISSYKALFTNFGVHKNAVNPNITMPYAHVSLEMKQQADS 290          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig963.21255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNQ3_ECTSI5.500e-1346.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNQ0_ECTSI9.390e-1345.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNS2_ECTSI2.650e-1245.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JV19_9PHAE3.580e-1245.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig963contigEcto-sp13_S_contig963:17117..19502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig963.21255.1mRNA_Ecto-sp13_S_contig963.21255.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig963 16406..19543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig963.21255.1 ID=prot_Ecto-sp13_S_contig963.21255.1|Name=mRNA_Ecto-sp13_S_contig963.21255.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=140bp
MCLVGGRSSSRSIRTFRMGTDPCFKQCQFVPPCFFFAQFPPPPSYRDFVY
GYLADSGGTSGSPGVPLSCNCITNTSDSHTINLLEIGLSTTKGYKSSDVD
ISSYTARSRYLGGNSDMVNASIAMPFVHLSMEIKQGANS*
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