prot_Ecto-sp13_S_contig9628.21252.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9628.21252.1
Unique Nameprot_Ecto-sp13_S_contig9628.21252.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length244
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9628.21252.1 vs. uniprot
Match: D8LT35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT35_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 2.420e-69
Identity = 112/137 (81.75%), Postives = 116/137 (84.67%), Query Frame = 0 
Query:  108 MHTSRTDDYLSAVKRNTCRSTSTLFEDGHIARPTNAPAYGLPAYQFDGRTALKFGEQSSRGTNECNREITRSSLHRYYGGSRGHGRSGQPSYELLPTGTKQDTCNAPFEREGRIDRNGSTAKPLVERSNRFDKPSWT 244
            MHTSRTDDYLSAV+ NTCRST TLFEDG +ARP++APAY LPAYQFDGRTAL FGEQSSRG NECNREITRS L RY GGSRGHGR GQPSYE  PTGTKQD  N PF REGRI RN ST KPLV RS RFDKPSWT
Sbjct:    1 MHTSRTDDYLSAVEPNTCRSTGTLFEDGDLARPSSAPAYDLPAYQFDGRTALMFGEQSSRGVNECNREITRS-LQRYDGGSRGHGRGGQPSYEGPPTGTKQDAFNGPFGREGRISRNSSTTKPLVGRSKRFDKPSWT 136
[Close]
BLAST of mRNA_Ecto-sp13_S_contig9628.21252.1 vs. uniprot
Match: A0A6H5KHX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX9_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 5.740e-34
Identity = 71/95 (74.74%), Postives = 74/95 (77.89%), Query Frame = 0 
Query:   39 MMRTHASLEQVSAAAHEAGAKGGSRGAPTSHSQVHSRDKRMSLASSGFESDCMLTARXXXXXXXXXXXDMHTSRTDDYLSAVKRNTCRSTSTLFE 133
            MMRTHASLE+VSAAA+EAGAK GSR A TSHSQVHSRD RM  ASSGFESDCM TAR           DMHTSRTDDYLSAV+ NTCRS  TLFE
Sbjct:    1 MMRTHASLEKVSAAANEAGAKAGSRRALTSHSQVHSRDTRMPPASSGFESDCMHTARGAESDTMITARDMHTSRTDDYLSAVEPNTCRSMGTLFE 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9628.21252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT35_ECTSI2.420e-6981.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHX9_9PHAE5.740e-3474.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9628contigEcto-sp13_S_contig9628:1..1069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9628.21252.1mRNA_Ecto-sp13_S_contig9628.21252.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9628 1..1069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9628.21252.1 ID=prot_Ecto-sp13_S_contig9628.21252.1|Name=mRNA_Ecto-sp13_S_contig9628.21252.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=244bp
MMRVQREERKPSSTLRHQPRAREPETGEHKVDECLTRGMMRTHASLEQVS
AAAHEAGAKGGSRGAPTSHSQVHSRDKRMSLASSGFESDCMLTARGAESD
TMITARDMHTSRTDDYLSAVKRNTCRSTSTLFEDGHIARPTNAPAYGLPA
YQFDGRTALKFGEQSSRGTNECNREITRSSLHRYYGGSRGHGRSGQPSYE
LLPTGTKQDTCNAPFEREGRIDRNGSTAKPLVERSNRFDKPSWT
back to top