prot_Ecto-sp13_S_contig96162.21238.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96162.21238.1
Unique Nameprot_Ecto-sp13_S_contig96162.21238.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length90
Homology
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A6H5JAL6_9PHAE (AAA_5 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAL6_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 5.740e-44
Identity = 82/90 (91.11%), Postives = 86/90 (95.56%), Query Frame = 0
Query:    1 SGLELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            SGL+ ELV LK LAVRTKGLFEWVDGPLVTAMRKGELILLDELSLA+DAVLERLNSVLEPGRSITLAEKGGEG+VGG G+AETVVAAPGF
Sbjct:  130 SGLQRELVLLKTLAVRTKGLFEWVDGPLVTAMRKGELILLDELSLADDAVLERLNSVLEPGRSITLAEKGGEGAVGGHGAAETVVAAPGF 219          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.350e-41
Identity = 81/88 (92.05%), Postives = 85/88 (96.59%), Query Frame = 0
Query:    3 LELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            LE E VSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGG+G+VGG+G+AE VVAAPGF
Sbjct:  927 LEREFVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGKGAVGGEGAAEAVVAAPGF 1014          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A4D9D334_9STRA (VWFA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D334_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.050e-25
Identity = 60/85 (70.59%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    8 VSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGG--EGSVGGQGSAETVVAAPGF 90
            V+L   + RT  LFEW DGPLVTAMR+GE++LLDE+SLAEDAVLERLNSVLEPGRS+TLAEKGG  EG   G+G    VVA PGF
Sbjct: 1693 VTLSQKSART--LFEWCDGPLVTAMRRGEVLLLDEISLAEDAVLERLNSVLEPGRSLTLAEKGGGSEGGREGEGDDSHVVAVPGF 1775          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A8J4C1D0_9CHLO (AAA domain-containing protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C1D0_9CHLO)

HSP 1 Score: 102 bits (255), Expect = 2.870e-24
Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    3 LELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            L+ +  +  A +   +  F W DGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE VVAAPGF
Sbjct:  236 LQADAATAAAASTEARAPFAWADGPLVTAMRRGDMILVDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVVVAAPGF 316          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A836C4P8_9CHLO (VWFA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4P8_9CHLO)

HSP 1 Score: 103 bits (258), Expect = 6.080e-24
Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0
Query:    1 SGLELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            + LE +  +  A A+  +  F W DGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE VVAAPGF
Sbjct: 1737 AALEGDAKAATASALEARAPFAWADGPLVTAMRRGDMILIDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVVVAAPGF 1819          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A8J4AMX9_9CHLO (AAA domain-containing protein (Fragment) n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AMX9_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 1.990e-23
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    3 LELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            L+ +  +    A   +  F W DGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE VVAAPGF
Sbjct:  378 LQADAATATVAATEARAPFAWADGPLVTAMRRGDMILVDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVVVAAPGF 458          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A835TB08_CHLIN (VWFA domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TB08_CHLIN)

HSP 1 Score: 102 bits (254), Expect = 2.110e-23
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   14 AVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            A   +  F WVDGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE VVAAPGF
Sbjct: 1821 ATEARSPFVWVDGPLVTAMRRGDMILVDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVVVAAPGF 1890          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A2K3DWG3_CHLRE (VWFA domain-containing protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DWG3_CHLRE)

HSP 1 Score: 102 bits (254), Expect = 2.110e-23
Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
Query:   14 AVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            A   +  F WVDGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE VVAAPGF
Sbjct: 1809 ATEARAPFVWVDGPLVTAMRRGDMILVDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVVVAAPGF 1878          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A7J7QEH6_9CHLO (VWFA domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEH6_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 2.540e-22
Identity = 55/89 (61.80%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    2 GLELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            GL   + +L+A A   +  F W DGPLV AMR+G+L+L+DEL+LAEDAVLERLNSVLEPGRS+TLAEKGG       G AE VV A GF
Sbjct: 1585 GLAAGVAALRAAAAAARAPFGWEDGPLVVAMRQGQLLLVDELNLAEDAVLERLNSVLEPGRSLTLAEKGG-------GGAELVVGAAGF 1666          
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Match: A0A250XSD8_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XSD8_9CHLO)

HSP 1 Score: 99.4 bits (246), Expect = 2.540e-22
Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 0
Query:    1 SGLELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAVLERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF 90
            S L+  L +  + A   +  F+WVDGPLVTAMR+G++IL+DE++LAEDAVLERLNSVLEPGR++TLAE+GGEG       AE + A PGF
Sbjct: 1712 SQLKNVLTTAISSAAAARAPFQWVDGPLVTAMRQGDMILVDEINLAEDAVLERLNSVLEPGRTLTLAERGGEG-------AEVITANPGF 1794          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96162.21238.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAL6_9PHAE5.740e-4491.11AAA_5 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FL28_ECTSI2.350e-4192.05Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A4D9D334_9STRA5.050e-2570.59VWFA domain-containing protein n=1 Tax=Nannochloro... [more]
A0A8J4C1D0_9CHLO2.870e-2460.23AAA domain-containing protein (Fragment) n=1 Tax=V... [more]
A0A836C4P8_9CHLO6.080e-2461.11VWFA domain-containing protein n=1 Tax=Edaphochlam... [more]
A0A8J4AMX9_9CHLO1.990e-2360.23AAA domain-containing protein (Fragment) n=1 Tax=V... [more]
A0A835TB08_CHLIN2.110e-2368.83VWFA domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A2K3DWG3_CHLRE2.110e-2368.83VWFA domain-containing protein n=1 Tax=Chlamydomon... [more]
A0A7J7QEH6_9CHLO2.540e-2261.80VWFA domain-containing protein n=1 Tax=Scenedesmus... [more]
A0A250XSD8_9CHLO2.540e-2258.89Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 3..87
e-value: 7.9E-14
score: 54.1
NoneNo IPR availablePANTHERPTHR22908MIDASIN-RELATEDcoord: 18..90
IPR011704ATPase, dynein-related, AAA domainPFAMPF07728AAA_5coord: 18..64
e-value: 2.5E-10
score: 40.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 16..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96162contigEcto-sp13_S_contig96162:244..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96162.21238.1mRNA_Ecto-sp13_S_contig96162.21238.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96162 244..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96162.21238.1 ID=prot_Ecto-sp13_S_contig96162.21238.1|Name=mRNA_Ecto-sp13_S_contig96162.21238.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=90bp
SGLELELVSLKALAVRTKGLFEWVDGPLVTAMRKGELILLDELSLAEDAV
LERLNSVLEPGRSITLAEKGGEGSVGGQGSAETVVAAPGF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011704ATPase_dyneun-rel_AAA
IPR027417P-loop_NTPase