prot_Ecto-sp13_S_contig96152.21235.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96152.21235.1
Unique Nameprot_Ecto-sp13_S_contig96152.21235.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length36
Homology
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: D7FJ97_ECTSI (Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ97_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 1.350e-16
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRSL 35
            MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRSL
Sbjct:  165 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRSL 199          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A7S0WGW3_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WGW3_9CRYP)

HSP 1 Score: 64.3 bits (155), Expect = 2.470e-11
Identity = 28/34 (82.35%), Postives = 30/34 (88.24%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRS 34
            MGDFD KNLCKNPTLKGTNP+T A TRASA CR+
Sbjct:  207 MGDFDAKNLCKNPTLKGTNPITGAKTRASAACRT 240          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A7R9Z7B4_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7B4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.580e-11
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGC 32
            MGDFDQ+N+CKNPTLKG NPVT ADTR SAGC
Sbjct:  211 MGDFDQRNICKNPTLKGENPVTGADTRVSAGC 242          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A7S0EIA2_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EIA2_9CRYP)

HSP 1 Score: 62.8 bits (151), Expect = 8.930e-11
Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 33
            MGDFD K +CKNPTL+GTNPVT ADTRASA CR
Sbjct:  204 MGDFDNKKICKNPTLQGTNPVTGADTRASASCR 236          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: L1ICC6_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1ICC6_GUITC)

HSP 1 Score: 61.2 bits (147), Expect = 3.370e-10
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 33
            MGDFD K +CKNPTL+GTNPVT  DTRASA CR
Sbjct:  204 MGDFDNKKICKNPTLQGTNPVTGVDTRASASCR 236          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A836CB03_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB03_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.340e-9
Identity = 26/33 (78.79%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 33
            MGDFD K+LCKNPTLKG NPVT A T+ SAGCR
Sbjct:  200 MGDFDLKSLCKNPTLKGENPVTGAPTKESAGCR 232          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A7S1H1V0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1H1V0_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.800e-9
Identity = 25/32 (78.12%), Postives = 27/32 (84.38%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGC 32
            +GDFD +NLCKNPTLKG N VT ADTR SAGC
Sbjct:   78 IGDFDIRNLCKNPTLKGENSVTGADTRLSAGC 109          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A0G4EER2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EER2_VITBC)

HSP 1 Score: 55.8 bits (133), Expect = 3.340e-9
Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRS 34
            +GDF+Q++LCKNPTLKG++P T  DTR S GCRS
Sbjct:   56 IGDFEQRSLCKNPTLKGSHPKTGVDTRESLGCRS 89          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: K8YV76_NANGC (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV76_NANGC)

HSP 1 Score: 55.1 bits (131), Expect = 6.880e-9
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCR 33
            MG+F+ + LCKNPTLKGTNPVT A T+ SAGC+
Sbjct:   58 MGEFNLRELCKNPTLKGTNPVTQAPTKESAGCK 90          
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Match: A0A7S0AL09_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AL09_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-8
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0
Query:    1 MGDFDQKNLCKNPTLKGTNPVTNADTRASAGC 32
            +G FDQK LC+NPTLKG NP T ADT+ SAGC
Sbjct:   75 IGSFDQKQLCRNPTLKGENPTTGADTKFSAGC 106          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96152.21235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ97_ECTSI1.350e-16100.00Thylakoid lumenal protein n=2 Tax=Ectocarpus TaxID... [more]
A0A7S0WGW3_9CRYP2.470e-1182.35Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7R9Z7B4_9STRA3.580e-1184.38Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0EIA2_9CRYP8.930e-1181.82Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
L1ICC6_GUITC3.370e-1078.79Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A836CB03_9STRA2.340e-978.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1H1V0_9STRA2.800e-978.13Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A0G4EER2_VITBC3.340e-967.65Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
K8YV76_NANGC6.880e-969.70Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S0AL09_9STRA1.050e-871.88Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96152contigEcto-sp13_S_contig96152:401..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96152.21235.1mRNA_Ecto-sp13_S_contig96152.21235.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96152 401..514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96152.21235.1 ID=prot_Ecto-sp13_S_contig96152.21235.1|Name=mRNA_Ecto-sp13_S_contig96152.21235.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=36bp
MGDFDQKNLCKNPTLKGTNPVTNADTRASAGCRSL*
back to top