prot_Ecto-sp13_S_contig96137.21233.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig96137.21233.1
Unique Name	prot_Ecto-sp13_S_contig96137.21233.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	105

Homology

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BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Match: D8LQT5_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT5_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 4.860e-59
Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 0

Query:    1 PLSAAVYNGTTAICAALIDKGADVDVMDWELQDFDAESDVKIRPVHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRRG 105
            PLSAAVYNGTTAICAALID GAD+D  DWELQDFDA+ DVKIRP+HDAARFGDVDILRLLL AGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLR G
Sbjct:  304 PLSAAVYNGTTAICAALIDNGADLDATDWELQDFDADGDVKIRPIHDAARFGDVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWG 408

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BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Match: D8LQT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT4_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.630e-57
Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 0

Query:    1 PLSAAVYNGTTAICAALIDKGADVDVMDWELQDFDAESDVKIRPVHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRRG 105
            PLSAAVY+GTTAICAALIDKGAD+D  DWELQDFD +SDVKIRP+HDAARF  VDILRLLL AGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLR G
Sbjct:  279 PLSAAVYSGTTAICAALIDKGADLDATDWELQDFDVDSDVKIRPIHDAARFRGVDILRLLLGAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLRWG 383

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BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Match: A0A6H5KEN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN5_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 5.040e-48
Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 0

Query:    1 PLSAAVYNGTTAICAALIDKGADVDVMDWELQDFDAESDVKIRPVHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVACR 91
            PLSAAVYNGTTAICAAL+DKGAD+D  DWELQDF ++ DVKIRP+HDAARFGDVDILRLLLVAGAGANSLSNFRRGD L+RWGTPLHVACR
Sbjct:  310 PLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNFRRGDVLQRWGTPLHVACR 400

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BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Match: A0A6H5KST3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KST3_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.090e-43
Identity = 76/89 (85.39%), Postives = 82/89 (92.13%), Query Frame = 0

Query:    1 PLSAAVYNGTTAICAALIDKGADVDVMDWELQDFDAESDVKIRPVHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVA 89
            PLSAAVYNGTTAICAAL+DKGAD+D  DWELQDF ++ DVKIRP+HDAARFGDVDILRLLLVAGAGANSLSN  R DDL+RWGTPLHVA
Sbjct:  310 PLSAAVYNGTTAICAALVDKGADLDATDWELQDFGSDLDVKIRPIHDAARFGDVDILRLLLVAGAGANSLSNVHRDDDLKRWGTPLHVA 398

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BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Match: D8LI67_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI67_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.260e-7
Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0

Query:    2 LSAAVYNGTTAICAALIDKGADVDVMD---WELQDFDAESDVKIRPVHDAARFGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRELLR 103
            LS A  NG   I +AL+  G D +  D   W              P+HDA +   VD+LRLLL AGA  ++ +  R G     W TPLH+ACRY+ + CV ELLR
Sbjct:  368 LSCAAKNGVPGIVSALLGAGLDPNERDRDGWA-------------PIHDAVQGDHVDVLRLLLRAGAERDAPT--RSGG----W-TPLHLACRYTSVECVVELLR 452

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig96137.21233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
D8LQT5_ECTSI	4.860e-59	91.43	Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto...	[more]
D8LQT4_ECTSI	1.630e-57	89.52	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KEN5_9PHAE	5.040e-48	87.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KST3_9PHAE	2.090e-43	85.39	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LI67_ECTSI	1.260e-7	40.95	Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..105 e-value: 3.5E-18 score: 67.7
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 1..105
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 3..103 e-value: 2.2E-9 score: 37.7
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..105 score: 19.916
None	No IPR available	PANTHER	PTHR24193	ANKYRIN REPEAT PROTEIN	coord: 42..105 coord: 1..74
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 44..72 score: 9.644
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 81..105 score: 9.324
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 1..29 score: 9.751

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig96137	contig	Ecto-sp13_S_contig96137:13..327 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig96137.21233.1	mRNA_Ecto-sp13_S_contig96137.21233.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig96137 13..327 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig96137.21233.1 ID=prot_Ecto-sp13_S_contig96137.21233.1|Name=mRNA_Ecto-sp13_S_contig96137.21233.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=105bp
PLSAAVYNGTTAICAALIDKGADVDVMDWELQDFDAESDVKIRPVHDAAR
FGDVDILRLLLVAGAGANSLSNFRRGDDLERWGTPLHVACRYSQLGCVRE
LLRRG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom
IPR002110	Ankyrin_rpt