prot_Ecto-sp13_S_contig96128.21230.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96128.21230.1
Unique Nameprot_Ecto-sp13_S_contig96128.21230.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length37
Homology
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BLAST of mRNA_Ecto-sp13_S_contig96128.21230.1 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 4.720e-13
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 
Query:    2 LVKIPELQENMFQLATEMERAGLVEEVVADGLALTD 37
            LVKIPELQENMFQLATEMERAGLVEEVVADGL+LTD
Sbjct:  118 LVKIPELQENMFQLATEMERAGLVEEVVADGLSLTD 153
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96128.21230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G7G8_ECTSI4.720e-1397.22Similar to vacuolar protein sorting 24 homolog n=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96128contigEcto-sp13_S_contig96128:379..489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96128.21230.1mRNA_Ecto-sp13_S_contig96128.21230.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96128 379..489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96128.21230.1 ID=prot_Ecto-sp13_S_contig96128.21230.1|Name=mRNA_Ecto-sp13_S_contig96128.21230.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=37bp
SLVKIPELQENMFQLATEMERAGLVEEVVADGLALTD
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