prot_Ecto-sp13_S_contig96110.21228.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig96110.21228.1
Unique Nameprot_Ecto-sp13_S_contig96110.21228.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length68
Homology
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A6H5JEG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG9_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 3.140e-18
Identity = 41/52 (78.85%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MGPLFPLKVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQ 52
            +G L PLKVILSTHAVVANGG+I LNGSHAVALAA+DLSVPVVC TGL + +
Sbjct:   46 IGRLLPLKVILSTHAVVANGGMITLNGSHAVALAAHDLSVPVVCFTGLSRTR 97          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 82.8 bits (203), Expect = 5.980e-17
Identity = 43/43 (100.00%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK 50
            KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK
Sbjct:  346 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK 388          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A7S2DRQ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DRQ5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.830e-11
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCYCKEIE 60
            KV+L THAV+ANGGLIA +G H +ALAA + SVPVVCVTGLFK+   Y  ++ 
Sbjct:   11 KVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLN 63          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A7S2GLW7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GLW7_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.630e-10
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCYCKEIE 60
            KV+L THAV+ANGGLIA +G H +ALAA + SVPVVCVTGLFK+   Y  ++ 
Sbjct:  243 KVVLPTHAVMANGGLIAPSGGHMLALAAQEHSVPVVCVTGLFKLCPLYPHDLN 295          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.700e-10
Identity = 32/43 (74.42%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK 50
            KVI+ THAVVANGGL+A  GS+ +ALAA +LSVPVVCVTGL+K
Sbjct:  271 KVIMPTHAVVANGGLVAGCGSYMIALAAKELSVPVVCVTGLYK 313          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A7S3XZZ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZZ5_HETAK)

HSP 1 Score: 62.0 bits (149), Expect = 7.170e-10
Identity = 32/58 (55.17%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCYCKEIEIAHTV 65
            KVI+  +AV+ANGGLIA  G H+VALAA  LSVPV+C+TGLFK+   Y   ++  +T+
Sbjct:  118 KVIMPCNAVMANGGLIAAAGGHSVALAAKSLSVPVMCITGLFKLCPLYPHNLDYFNTL 175          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: A0A197JQR0_9FUNG (Translation initiation factor eIF-2B beta subunit n=2 Tax=Mortierellaceae TaxID=4854 RepID=A0A197JQR0_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 1.550e-8
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCYCKEIEIAHTVTFS 68
            KVIL THAV+ANGGL+A++G+H +A AA   S+PVV  TGL+K+   Y  + E +  VTF+
Sbjct:  235 KVILGTHAVLANGGLVAISGTHMMAAAAKHHSIPVVVCTGLYKLSPLYPYD-EDSFNVTFN 294          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: L8GQT6_ACACA (Translation initiation factor eif2b subunit beta, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQT6_ACACA)

HSP 1 Score: 58.2 bits (139), Expect = 2.940e-8
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK 50
            KVIL THAV+ANGGLIA  GSHAVALAA   +VPVV   GL+K
Sbjct:  248 KVILGTHAVLANGGLIAFTGSHAVALAAKHHAVPVVVCMGLYK 290          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: B7G270_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G270_PHATC)

HSP 1 Score: 58.2 bits (139), Expect = 2.970e-8
Identity = 30/51 (58.82%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCYCKE 58
            KV+LS HAV+ANGGL+A +G + VALAA+  SVP VC+TG+FK+   Y  E
Sbjct:  260 KVLLSAHAVLANGGLVANSGCNMVALAAHHNSVPTVCITGMFKLCPMYPHE 310          
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Match: W7TWQ5_9STRA (Translation initiation factor eif-2b subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ5_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.010e-8
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    8 KVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFKVQYCY 55
            +V+L   A++ANGGLIA  G H  ALAA +LSVPVVCVTGLFK+   Y
Sbjct:  241 QVLLPCRALIANGGLIAPCGGHMAALAAKELSVPVVCVTGLFKLSPVY 288          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig96110.21228.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEG9_9PHAE3.140e-1878.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHD8_ECTSI5.980e-17100.00Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S2DRQ5_9STRA2.830e-1162.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2GLW7_9STRA2.630e-1062.26Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A836CBW3_9STRA3.700e-1074.42Eukaryotic translation initiation factor 2B beta s... [more]
A0A7S3XZZ5_HETAK7.170e-1055.17Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A197JQR0_9FUNG1.550e-852.46Translation initiation factor eIF-2B beta subunit ... [more]
L8GQT6_ACACA2.940e-872.09Translation initiation factor eif2b subunit beta, ... [more]
B7G270_PHATC2.970e-858.82Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
W7TWQ5_9STRA4.010e-862.50Translation initiation factor eif-2b subunit beta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042529Initiation factor 2B-like, C-terminalGENE3D3.40.50.10470coord: 7..65
e-value: 7.0E-13
score: 50.4
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 8..52
e-value: 5.8E-7
score: 29.0
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 8..56
NoneNo IPR availablePANTHERPTHR45859:SF1TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETAcoord: 8..56
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 8..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig96110contigEcto-sp13_S_contig96110:118..321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig96110.21228.1mRNA_Ecto-sp13_S_contig96110.21228.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig96110 118..321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig96110.21228.1 ID=prot_Ecto-sp13_S_contig96110.21228.1|Name=mRNA_Ecto-sp13_S_contig96110.21228.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp
MGPLFPLKVILSTHAVVANGGLIALNGSHAVALAANDLSVPVVCVTGLFK
VQYCYCKEIEIAHTVTFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042529IF_2B-like_C
IPR000649IF-2B-related
IPR037171NagB/RpiA_transferase-like