prot_Ecto-sp13_S_contig961.21226.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig961.21226.1
Unique Nameprot_Ecto-sp13_S_contig961.21226.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length380
Homology
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: D8LQU2_ECTSI (Major facilitator superfamily permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQU2_ECTSI)

HSP 1 Score: 515 bits (1326), Expect = 6.150e-176
Identity = 331/393 (84.22%), Postives = 336/393 (85.50%), Query Frame = 0
Query:    1 MAGGGATICVRALAALCCTLLVTTGRATSKATTTRRRGIGANGRAPGNGGELGRRGSSARSTAWANHNHGSRKPLISSLRGGGDVSPELGPYSWIPAGEGDGGSLVRLSDTGEVVAGQVTPTSSDGAGKVAIASVTAAVAAVFAKFRVGRGSDPAAASGGXXXXXXXXXXXXXXXXXSMVKKEAPAAGAA-------------VNAAAKKKKAAKALKDRKTAAAERALKDXXXXXXXXXXXXXXXXXXXXXXXXXXXSQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMYRQAK 380
            MAGGGATI VRALAALCCTLLVTTGRATSKATTTRR   GANGRA GNGGELGR G+SARSTAWANHNHGSRKPL+SSLRGGGDVSPELGPYSWIPAGEGDGGSLVRLSDTGEVVAGQVTPTSSDGAGKVA+ASVTAAVAAVFAKFRVGRGSDPAAASGG                 SMVKK   A                 VNAAAKK KAAKALKDR           XXXXXXXXXXXXXXXXXXXXXXXXXXXSQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTL+TVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMY  A+
Sbjct:    1 MAGGGATIWVRALAALCCTLLVTTGRATSKATTTRRSRSGANGRALGNGGELGRLGTSARSTAWANHNHGSRKPLLSSLRGGGDVSPELGPYSWIPAGEGDGGSLVRLSDTGEVVAGQVTPTSSDGAGKVAVASVTAAVAAVFAKFRVGRGSDPAAASGGAAPAAASQKDAEPGVA-SMVKKGVAAXXXXXPKEAXXXXXXXXVNAAAKKNKAAKALKDRXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXSQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLMTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMYSMAQ 391          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A6H5J9A0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9A0_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 2.240e-132
Identity = 287/373 (76.94%), Postives = 295/373 (79.09%), Query Frame = 0
Query:   59 ARSTAWANHNHGSRKPLISSLRGGGDVSPELGPYSWIPAGEGDGGSLVRLSDTGEVVAGQVTPTSSDGAGKVAIASVTAAVAAVFAKFRVGRGSDPAAASGGXXXXXXXXXXXXXXXXXSMVKKE-------------APAAGAAVNAAAKKKKA---------------------------------------AKALKDRKTAAAERALKDXXXXXXXXXXXXXXXXXXXXXXXXXXXSQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMYRQA 379
            ARSTAWANHNHGSRKPL+SSLRGGGDVSPELGPYSWIPAGEGDGG+LVRLS+TGEVV GQVTPTSSDGAGKVAIASVTAAVAAVFAKFRVGRGSDPAAASGGXXXXXXXXXXXXXXXXX                   A + G A   AA +K A                                       AKAL+DRKTA        XXXXXXXXXXXXXXXXXXXXXXXXXX SQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGF+LTYHSRRVWMLLLASAIDGCTSC+  QA
Sbjct:   22 ARSTAWANHNHGSRKPLLSSLRGGGDVSPELGPYSWIPAGEGDGGTLVRLSETGEVVGGQVTPTSSDGAGKVAIASVTAAVAAVFAKFRVGRGSDPAAASGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAASGGGATPGAASQKDAEPGVASMGKKGVAXXXXXXXXXXXXXXXXXXXXXXXXXAAKALQDRKTAXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXVSQATMSVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFFLTYHSRRVWMLLLASAIDGCTSCIMAQA 393          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S3XMV7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMV7_HETAK)

HSP 1 Score: 134 bits (336), Expect = 6.110e-32
Identity = 64/123 (52.03%), Postives = 89/123 (72.36%), Query Frame = 0
Query:  254 QNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMY 376
            Q A R S  +    P   A  YF +++  IPVLPKVVN +++G+  VT+ SA+LYG +S  DA FT LTV  H S+SDK+GRRPF+AL++LGLG+GF ++  ++  WML++A+A+DGCTSCMY
Sbjct:  102 QPADRVSQKIGILVPTLVAMNYFFSLSLVIPVLPKVVNSVVSGAEEVTSRSASLYGTVSGIDALFTFLTVNAHGSLSDKFGRRPFMALASLGLGVGFLISSQAQNAWMLMVAAALDGCTSCMY 224          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S2UYU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYU2_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.750e-26
Identity = 53/101 (52.48%), Postives = 77/101 (76.24%), Query Frame = 0
Query:  278 AMAFTIPVLPKVVNELITGS--NAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMY 376
            A++F IPVLPKVVN++++G   + VT A A++YG++S  DA FT LTV     +SD +GR+PF+  +++GLG GF LT  +R+ WMLL+A+A+DGC+SCMY
Sbjct:    1 AISFVIPVLPKVVNDVVSGGTQSGVTPAGASMYGVVSGMDALFTFLTVSAAGVLSDHFGRKPFMLYASVGLGTGFALTCFARKTWMLLVAAALDGCSSCMY 101          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S0TRX5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TRX5_HEMAN)

HSP 1 Score: 105 bits (262), Expect = 3.150e-21
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0
Query:  272 AFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTY---HSRRVWMLLLASAIDGCTSCMY 376
            A LYF+++A  IP +PK+VN ++TG+  VT++S  +   L +TD  FT LT  F  ++SD+YGR+PFL +SALG+ +G  L     H  RVW + L ++IDGCTSCM+
Sbjct:   91 AMLYFMSVALAIPSMPKLVNNILTGAGRVTSSSQMVLAALLATDGFFTFLTNNFWGTLSDRYGRKPFLTMSALGIAVGAALVAVGAHMGRVWPMFLGASIDGCTSCMF 198          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S2XVI5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVI5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.020e-16
Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 0
Query:  263 VSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCM 375
            +S  WP+ + F++ +  A   P LP+VVNE+++G  +VT  SA  YGLL+        LTV    ++SD++GR+PFL LSA+GLG+ +      + VW+L L + I G T  M
Sbjct:   70 ISLVWPISTYFIHSVGCALVYPALPRVVNEIVSGGESVTFQSAGTYGLLTGLMGLCGFLTVSGAGTLSDQFGRKPFLILSAIGLGMNYLAACFGKSVWILFLGAMIAGSTQFM 182          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S2CZ70_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CZ70_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.830e-11
Identity = 49/127 (38.58%), Postives = 71/127 (55.91%), Query Frame = 0
Query:  254 QNATRKSTGVS-PS--WPMFSAFLYFLAMAFTIPVLPKVVNELIT--GSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCM 375
            Q+ TR   G + PS  W +   +LYF+A+ F+IP LP+V+  ++   GS  VT AS  L G + + D   T   V F  ++SD  GR+P +A SALG GL   +   + +   L LA  +DG +SCM
Sbjct:   61 QDGTRLKGGYARPSFKWAVLHNWLYFIALGFSIPNLPRVIATIVNEDGSAGVTPASTRLKGDVEAVDKILTFCGVGFLGALSDVKGRKPLMAWSALGFGLTLLIQGLTTQTSHLYLADVVDGLSSCM 187          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A836CIS1_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS1_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.510e-11
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0
Query:  329 MSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCMYRQAK 380
            MSD YGR+PF+ LS +GLGLGF +T  SRRVW LLLA+A+DG +SCMY  A+
Sbjct:    1 MSDTYGRKPFMLLSTVGLGLGFTITLLSRRVWPLLLAAAVDGSSSCMYSIAQ 52          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A7S4A3D9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3D9_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.320e-10
Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 0
Query:  259 KSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELIT--GSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTSCM 375
            K   VS +W +   +LYFL++   IPVLPKV+   +   G+  +T+ SA + G +   D   T L V    + SD  GR+P +ALSALG      +   + +V     A AIDG TSCM
Sbjct:   57 KQKQVSYAWAVLHNWLYFLSLGLCIPVLPKVIASTVNDDGAAVITSKSARVAGDVEGVDKLLTFLFVGALGACSDGVGRKPLIALSALGYATTVLVQARATKVAHFFAADAIDGLTSCM 175          
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Match: A0A1G6TXK0_9GAMM (MFS transporter, DHA1 family, tetracycline resistance protein n=3 Tax=Xanthomonadales TaxID=135614 RepID=A0A1G6TXK0_9GAMM)

HSP 1 Score: 65.9 bits (159), Expect = 3.750e-8
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  274 LYFLAMAFTIPVLPKVVNELITGSNAVTAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGFYLTYHSRRVWMLLLASAIDGCTS 373
            L  LA+   IP+LPK++ E   G +   A +ATLYGL +   A+   L      ++SD++GRRP + LS LGLGL + L   +  +W LL+   + G T+
Sbjct:   29 LDILALGLIIPILPKLILEFSAGDS---ARAATLYGLFAVAFAAMQFLASPVLGALSDRFGRRPVILLSNLGLGLDYILMALAPSLWWLLVGRLLAGITA 125          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig961.21226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQU2_ECTSI6.150e-17684.22Major facilitator superfamily permease n=1 Tax=Ect... [more]
A0A6H5J9A0_9PHAE2.240e-13276.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMV7_HETAK6.110e-3252.03Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UYU2_9STRA2.750e-2652.48Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0TRX5_HEMAN3.150e-2147.22Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2XVI5_9STRA9.020e-1639.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CZ70_9STRA1.830e-1138.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CIS1_9STRA4.510e-1165.38Major facilitator superfamily domain-containing pr... [more]
A0A7S4A3D9_9STRA1.320e-1037.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1G6TXK0_9GAMM3.750e-838.00MFS transporter, DHA1 family, tetracycline resista... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 213..240
NoneNo IPR availableGENE3D1.20.1250.20coord: 268..376
e-value: 1.3E-9
score: 39.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..354
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 267..286
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..266
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 287..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 355..359
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 360..376
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.708
NoneNo IPR availableTMHMMTMhelixcoord: 265..287
NoneNo IPR availableTMHMMTMhelixcoord: 337..354
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
IPR011701Major facilitator superfamilyPFAMPF07690MFS_1coord: 270..375
e-value: 2.1E-8
score: 33.5
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 268..380
score: 8.549
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 269..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig961contigEcto-sp13_S_contig961:485..5749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig961.21226.1mRNA_Ecto-sp13_S_contig961.21226.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig961 485..5749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig961.21226.1 ID=prot_Ecto-sp13_S_contig961.21226.1|Name=mRNA_Ecto-sp13_S_contig961.21226.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=380bp
MAGGGATICVRALAALCCTLLVTTGRATSKATTTRRRGIGANGRAPGNGG
ELGRRGSSARSTAWANHNHGSRKPLISSLRGGGDVSPELGPYSWIPAGEG
DGGSLVRLSDTGEVVAGQVTPTSSDGAGKVAIASVTAAVAAVFAKFRVGR
GSDPAAASGGGATPAAASQKDAEPGVASMVKKEAPAAGAAVNAAAKKKKA
AKALKDRKTAAAERALKDKKAAAERVLKEKKSAAERAAKEKRVAVSQATM
SVVQNATRKSTGVSPSWPMFSAFLYFLAMAFTIPVLPKVVNELITGSNAV
TAASATLYGLLSSTDASFTLLTVKFHASMSDKYGRRPFLALSALGLGLGF
YLTYHSRRVWMLLLASAIDGCTSCMYRQAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
IPR036259MFS_trans_sf