prot_Ecto-sp13_S_contig9605.21223.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9605.21223.1
Unique Nameprot_Ecto-sp13_S_contig9605.21223.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length168
Homology
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A6H5K617_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K617_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 8.380e-113
Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKAQP 167
            I+VSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKAQP
Sbjct:   47 IKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKAQP 213          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: D7G7C5_ECTSI (Coatomer subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C5_ECTSI)

HSP 1 Score: 326 bits (836), Expect = 2.390e-103
Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKAQP 167
            I+VSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPG TKAQP
Sbjct:  801 IKVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGTTKAQP 967          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A7S2V1X2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1X2_9STRA)

HSP 1 Score: 264 bits (675), Expect = 3.100e-86
Identity = 133/168 (79.17%), Postives = 147/168 (87.50%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPAS-CSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKAQP 167
            I+VSSTETGH+FGTIVYENSSTA+K YINLNDIH+DIMDYI P+S C+++AFR MW EFEWENKVA+NTSF +L+A+L HLVA TN  CLTP SSL G SSFLAANLYA S+FGED LVNVSVEKK DADGKLSG+VRIRSKTQGIALSLGDRITLVQRGP     QP
Sbjct:  147 IKVSSTETGHVFGTIVYENSSTAQKAYINLNDIHLDIMDYIYPSSNCTDDAFRRMWEEFEWENKVAINTSFDELSAYLSHLVAHTNMACLTPTSSLGGQSSFLAANLYAKSIFGEDVLVNVSVEKKDDADGKLSGYVRIRSKTQGIALSLGDRITLVQRGPLKATPQP 314          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A835Z7E2_9STRA (Coatomer subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E2_9STRA)

HSP 1 Score: 278 bits (710), Expect = 4.390e-85
Identity = 138/163 (84.66%), Postives = 151/163 (92.64%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGAT 163
            I+VSSTETGHIFGTIV+ENSSTAEK YINL+DIH+DIMDYI+PA+CSEEAFRSMWAEFEWENKV++NT+FTDLN FL HLVA+TNT CLTP S+  G SSFLAANLYA+SVFGEDALVNVSVEKK+DA G L GHVRIRSKTQGIALSLGDRITLVQRG GAT
Sbjct:  794 IKVSSTETGHIFGTIVFENSSTAEKAYINLSDIHLDIMDYIRPATCSEEAFRSMWAEFEWENKVSINTTFTDLNEFLAHLVAQTNTTCLTPTSARHGPSSFLAANLYAVSVFGEDALVNVSVEKKADAGGALGGHVRIRSKTQGIALSLGDRITLVQRGAGAT 956          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: F0YGU1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGU1_AURAN)

HSP 1 Score: 259 bits (662), Expect = 1.380e-79
Identity = 128/158 (81.01%), Postives = 143/158 (90.51%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQR 158
            I+VSSTETGHIFGTIVYE SSTAEKTYINLN+IH+DIMDYI+PASCS++AFR MWAEFEWENKVA++T+   LN FL+H+V  TN  CLTP SSL G+SSFLAANLYA S+FGEDALVNVSVEKK DADGKLSG++RIRSKTQGIALSLGDRIT VQR
Sbjct:  583 IKVSSTETGHIFGTIVYEKSSTAEKTYINLNNIHLDIMDYIRPASCSDQAFRHMWAEFEWENKVAISTNIASLNDFLEHIVTSTNMCCLTPSSSLGGTSSFLAANLYAKSIFGEDALVNVSVEKKDDADGKLSGYIRIRSKTQGIALSLGDRITAVQR 740          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A7S1E5N2_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E5N2_9STRA)

HSP 1 Score: 244 bits (623), Expect = 5.390e-79
Identity = 125/165 (75.76%), Postives = 140/165 (84.85%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRGPGATKA 165
            I+VSSTETGHIFGTIVY+++ST EK YINLNDIHMDIMDYI+PA+C++EAFRSMWAEFEWENKVA++TS   L  FLKH+V  TN  CLTP    +   SFLAANLYA SVFGEDALVNVSVEKK D DGKL+G++RIRSKTQGIALSLGDRIT VQRG  A KA
Sbjct:  104 IKVSSTETGHIFGTIVYDDTSTMEKGYINLNDIHMDIMDYIRPATCTDEAFRSMWAEFEWENKVAISTSIPGLIEFLKHIVKSTNMCCLTPHDE-EEKGSFLAANLYARSVFGEDALVNVSVEKKDDNDGKLAGYIRIRSKTQGIALSLGDRITTVQRGSPAKKA 267          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: W7TX10_9STRA (Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX10_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.160e-78
Identity = 129/158 (81.65%), Postives = 143/158 (90.51%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQR 158
            I+VSSTETGHIFGTIVYENSSTAEK  +NLNDI MDIMDYI+PASCS+EAFR+MWAEFEWENKVA+NT+F DL AFL H+V+ TN  CLTP SSL G S+FLAANLYA SVFGEDALVN+SVEKK DADG+LSG+VRIRSKTQGIALSLGDRIT +QR
Sbjct:  812 IKVSSTETGHIFGTIVYENSSTAEKGTVNLNDIQMDIMDYIRPASCSDEAFRAMWAEFEWENKVAINTTFLDLQAFLTHVVSSTNMECLTPTSSLSGESAFLAANLYAKSVFGEDALVNLSVEKKDDADGRLSGYVRIRSKTQGIALSLGDRITAIQR 969          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A7S1BR84_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BR84_9STRA)

HSP 1 Score: 238 bits (607), Expect = 7.840e-78
Identity = 118/158 (74.68%), Postives = 134/158 (84.81%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQR 158
            I+VSSTETGHIFGT+VYEN+S  EK YINLNDIHMDIMDYI+PA CS+E FRSMWAEFEWENKVA++T+   L  FL H++  TN  CLTP    +G S+F+AANLYA SVFGEDALVNVSVEKK D DGKL+G++RIRSKTQGIALSLGDRIT VQR
Sbjct:   16 IKVSSTETGHIFGTLVYENASNGEKGYINLNDIHMDIMDYIRPAFCSDEVFRSMWAEFEWENKVAISTTIPSLVEFLDHIILSTNMRCLTPFDR-EGKSTFVAANLYARSVFGEDALVNVSVEKKEDNDGKLAGYIRIRSKTQGIALSLGDRITSVQR 172          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A7S4E6E8_9STRA (Coatomer subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6E8_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.490e-75
Identity = 121/158 (76.58%), Postives = 142/158 (89.87%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQR 158
            I+VSSTETGHIFGTIVYENSS AEK+ INLN IH+DIMDYI+PA C++E FR+MWAEFEWENKVA+ T+ ++L  FL+H++++TN  CLTP S+L G+SSFLAANLYA S+FGEDALVNVSVEKK DADGKLSG++RIRSKTQGIALSLGDRIT VQR
Sbjct:  798 IKVSSTETGHIFGTIVYENSSNAEKSIINLNSIHLDIMDYIRPALCTDETFRAMWAEFEWENKVAIATAISELGTFLEHIISETNMRCLTPQSALGGTSSFLAANLYAKSIFGEDALVNVSVEKKEDADGKLSGYIRIRSKTQGIALSLGDRITAVQR 955          
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Match: A0A0W8DT29_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DT29_PHYNI)

HSP 1 Score: 234 bits (598), Expect = 1.000e-74
Identity = 114/159 (71.70%), Postives = 141/159 (88.68%), Query Frame = 0
Query:    1 IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEAFRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSSFLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLGDRITLVQRG 159
            I+VSSTETGHIFGTIVY+++S AEKTY+NLNDIH+DIMDYIKPA+C++ AFR+MWAEFEWENKVAV+T  +++  FL+H+V KTN  C+TP +SL G ++FLAANLYA SVFGEDALVN+SVEK+    G+++G++RIRSKTQGIALSLGDRIT VQRG
Sbjct:  134 IKVSSTETGHIFGTIVYDSASGAEKTYVNLNDIHLDIMDYIKPATCTDAAFRAMWAEFEWENKVAVHTELSNVFEFLQHVVDKTNMRCMTPTASLGGDTNFLAANLYAKSVFGEDALVNLSVEKQDS--GRIAGYIRIRSKTQGIALSLGDRITAVQRG 290          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9605.21223.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K617_9PHAE8.380e-11399.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7C5_ECTSI2.390e-10398.80Coatomer subunit beta n=1 Tax=Ectocarpus siliculos... [more]
A0A7S2V1X2_9STRA3.100e-8679.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835Z7E2_9STRA4.390e-8584.66Coatomer subunit beta n=1 Tax=Tribonema minus TaxI... [more]
F0YGU1_AURAN1.380e-7981.01Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1E5N2_9STRA5.390e-7975.76Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
W7TX10_9STRA1.160e-7881.65Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxI... [more]
A0A7S1BR84_9STRA7.840e-7874.68Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S4E6E8_9STRA6.490e-7576.58Coatomer subunit beta n=3 Tax=Pelagomonas calceola... [more]
A0A0W8DT29_PHYNI1.000e-7471.70Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029446Coatomer beta subunit, appendage platform domainPFAMPF14806Coatomer_b_Cplacoord: 24..153
e-value: 7.8E-58
score: 194.0
IPR016460Coatomer beta subunit (COPB1)PANTHERPTHR10635COATOMER SUBUNIT BETAcoord: 1..159
NoneNo IPR availablePANTHERPTHR10635:SF0COATOMER SUBUNIT BETAcoord: 1..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9605contigEcto-sp13_S_contig9605:546..2428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9605.21223.1mRNA_Ecto-sp13_S_contig9605.21223.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9605 546..2428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9605.21223.1 ID=prot_Ecto-sp13_S_contig9605.21223.1|Name=mRNA_Ecto-sp13_S_contig9605.21223.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=168bp
IQVSSTETGHIFGTIVYENSSTAEKTYINLNDIHMDIMDYIKPASCSEEA
FRSMWAEFEWENKVAVNTSFTDLNAFLKHLVAKTNTNCLTPLSSLDGSSS
FLAANLYAMSVFGEDALVNVSVEKKSDADGKLSGHVRIRSKTQGIALSLG
DRITLVQRGPGATKAQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029446COPB1_appendage_platform_dom
IPR016460COPB1