prot_Ecto-sp13_S_contig95923.21207.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95923.21207.1
Unique Nameprot_Ecto-sp13_S_contig95923.21207.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length175
Homology
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A068FW61_9ZZZZ (Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=uncultured organism TaxID=155900 RepID=A0A068FW61_9ZZZZ)

HSP 1 Score: 314 bits (805), Expect = 2.610e-101
Identity = 143/175 (81.71%), Postives = 165/175 (94.29%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD+RD+RFKDP+WSRNQFFD +KQ+YLL+++WA+DL DEASDLDPHT+HKAQFYVKQIASAL+P+NFVGTNPELIKETLASNGENLVRGL  +AED+ EGHGDLK+RMTDT +FKVG+NMA TPGKVVMRN+VCE+IQY PTT +VLKRPLL+VPPWINKFYILDLNP+KSFI W
Sbjct:  182 PDARDKRFKDPDWSRNQFFDIIKQSYLLLADWAEDLADEASDLDPHTRHKAQFYVKQIASALSPSNFVGTNPELIKETLASNGENLVRGLKFMAEDITEGHGDLKIRMTDTSRFKVGQNMAMTPGKVVMRNEVCEIIQYAPTTPSVLKRPLLIVPPWINKFYILDLNPEKSFIAW 356          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A838XK56_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=2 Tax=Stappia TaxID=152161 RepID=A0A838XK56_9HYPH)

HSP 1 Score: 280 bits (715), Expect = 1.220e-88
Identity = 127/175 (72.57%), Postives = 154/175 (88.00%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RD+RF DPEWS NQFFD +KQ YL+ S WA+ LV EA+DLD HT+HKA FYVKQIA+AL+P+NFV TNPEL++ETL SNGENLVRG+ +LAED++ G G+L++R +D  KFKVGEN+A TPGKV+ +NDVC++IQYTPTTDTVLKRPL++VPPWINKFYILDLNP+KSFIKW
Sbjct:  109 PDPRDKRFGDPEWSENQFFDFVKQLYLITSQWAEQLVVEAADLDEHTRHKADFYVKQIANALSPSNFVLTNPELLRETLESNGENLVRGMKLLAEDIEAGKGELRLRQSDPTKFKVGENLALTPGKVIAQNDVCQVIQYTPTTDTVLKRPLMIVPPWINKFYILDLNPEKSFIKW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A327JJL5_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Rhodobium orientis TaxID=34017 RepID=A0A327JJL5_9HYPH)

HSP 1 Score: 278 bits (712), Expect = 3.420e-88
Identity = 125/175 (71.43%), Postives = 154/175 (88.00%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RD+RF+DPEW +NQFFD LKQAYL+ S WA+ +V +A+DLD HT+HKA FYVKQIA+AL+PTNF+ TNPEL++ETL SNGENLVRG+ MLAED++ G GDL++R +D  KFKVGEN+ATTPGKV+ +ND+C+++QYTPTTD VLKRPLL+VPPWINKFYILDLN  KSFI+W
Sbjct:  109 PDPRDKRFQDPEWQKNQFFDFLKQAYLITSQWAETMVADAADLDEHTRHKADFYVKQIANALSPTNFILTNPELLRETLDSNGENLVRGMHMLAEDIKAGGGDLRLRQSDPTKFKVGENLATTPGKVIFQNDICQVLQYTPTTDEVLKRPLLIVPPWINKFYILDLNADKSFIRW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A7X5F1P4_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Pannonibacter sp. XCT-53 TaxID=2750085 RepID=A0A7X5F1P4_9HYPH)

HSP 1 Score: 273 bits (697), Expect = 5.940e-86
Identity = 124/173 (71.68%), Postives = 148/173 (85.55%), Query Frame = 0
Query:    3 SRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            +RD+RF+DP+W  NQFFD LKQ YL+ SNWA+D+V EA  LD HT+HKA FYVKQIA+AL+P+NFV TNP L++ETLA+NGENLVRG+  L ED++ G GD+K+R TD  KF+VG N+A TPGKV+ RNDVCELIQYTPTTDTVLKRPLL+VPPWINKFYILDL P KSFI+W
Sbjct:  111 ARDKRFEDPDWQENQFFDFLKQFYLITSNWANDMVAEAEGLDEHTRHKADFYVKQIANALSPSNFVLTNPALLRETLANNGENLVRGMQFLVEDIKAGKGDIKIRQTDASKFEVGRNLALTPGKVIARNDVCELIQYTPTTDTVLKRPLLIVPPWINKFYILDLTPDKSFIQW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A2E6Y9T5_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Stappia sp. TaxID=1870903 RepID=A0A2E6Y9T5_9HYPH)

HSP 1 Score: 270 bits (691), Expect = 4.660e-85
Identity = 122/175 (69.71%), Postives = 150/175 (85.71%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RD+RF DPEW+ NQFFD +KQ YL+ S WA+ LV EA DLD HT+HKA FYVKQIA+AL+P+NFV TNPEL++ETL SNG+NLVRG+ +LAED+  G G+LK+R +D  KF+VGEN+A TPGKV+  NDVC++IQYTPTT+ VLKRPL++VPPWINKFYILDLNP+KSFI+W
Sbjct:  109 PDPRDKRFGDPEWNDNQFFDFVKQIYLITSRWAEQLVVEAGDLDEHTRHKADFYVKQIANALSPSNFVLTNPELLRETLESNGDNLVRGMKLLAEDIAAGKGELKIRQSDPTKFRVGENLALTPGKVIAENDVCQVIQYTPTTEKVLKRPLMIVPPWINKFYILDLNPEKSFIRW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0NPX8_ROSAI (Poly-beta-hydroxybutyrate synthase (Fragment) n=1 Tax=Roseibium aggregatum (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC 16684 / NCIMB 2208 / IAM 12614 / B1) TaxID=384765 RepID=A0NPX8_ROSAI)

HSP 1 Score: 263 bits (672), Expect = 5.500e-85
Identity = 117/173 (67.63%), Postives = 148/173 (85.55%), Query Frame = 0
Query:    3 SRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            +RD+RF DPEW +NQFFD +KQ YL+ S WA+D+V +A  LD HT+HKA+FYV QIA+A++P+NFV TNPEL++ TL SNGENLV+G+  L EDL+ G GDLK+R TD  KF++GEN+ TTPGKV+ +NDVC++IQY+PTT+ VLKRPLL+VPPWINKFYILDLNP+KSFIKW
Sbjct:  111 ARDKRFADPEWEKNQFFDFIKQLYLITSKWAEDMVHDAQGLDEHTRHKAEFYVTQIANAVSPSNFVLTNPELLRLTLESNGENLVKGMRHLVEDLKTGKGDLKIRQTDPNKFRLGENLGTTPGKVISQNDVCQVIQYSPTTEEVLKRPLLIVPPWINKFYILDLNPEKSFIKW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A7X3LSF7_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=2 Tax=Stappiaceae TaxID=2821832 RepID=A0A7X3LSF7_9HYPH)

HSP 1 Score: 270 bits (690), Expect = 6.570e-85
Identity = 119/175 (68.00%), Postives = 154/175 (88.00%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RD+RF+DPEW+ NQFFD +KQ YL+ S WA+++V +A++LD HT+HKA FYVKQIA+AL+P+NFV TNPEL++ETL SNGENLV+G+ +LAED++ G G+L++R +D  KFKVG N+A TPGKV+ +NDVC++IQYTPTTD VLKRPL++VPPWINKFYILDLNP+KSFI+W
Sbjct:  109 PDPRDKRFQDPEWNDNQFFDFVKQLYLITSQWAEEMVADAAELDDHTRHKADFYVKQIANALSPSNFVLTNPELLRETLESNGENLVKGMQLLAEDIKAGKGELRIRQSDPTKFKVGTNLAMTPGKVIAQNDVCQVIQYTPTTDQVLKRPLMIVPPWINKFYILDLNPEKSFIRW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A316C8M9_PSESE (Polyhydroxyalkanoate synthase n=2 Tax=Pseudaminobacter salicylatoxidans TaxID=93369 RepID=A0A316C8M9_PSESE)

HSP 1 Score: 270 bits (691), Expect = 6.630e-85
Identity = 121/175 (69.14%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            P+  D+RF+DPEW RN FFD LKQ YL+ + WA+DLV++A  LD HT+HKA FYVKQ+++A++P+NF+ TNPEL +ET+ASNGENLVRG+ MLAED+Q GHGDLK+R  D+ +F+VG NMATTPGKVV R+DV E+IQY+P T+TVLKRPLL+ PPWINKFYILDLNPQKSFI+W
Sbjct:  125 PEKGDKRFQDPEWGRNAFFDFLKQTYLVTTRWANDLVEQAEGLDEHTRHKASFYVKQVSNAISPSNFILTNPELFRETVASNGENLVRGMKMLAEDIQAGHGDLKLRQADSSQFEVGRNMATTPGKVVGRSDVAEIIQYSPATETVLKRPLLICPPWINKFYILDLNPQKSFIRW 299          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A1M7Z9U6_9HYPH (Polyhydroxyalkanoate synthase n=1 Tax=Pseudoxanthobacter soli DSM 19599 TaxID=1123029 RepID=A0A1M7Z9U6_9HYPH)

HSP 1 Score: 269 bits (688), Expect = 1.310e-84
Identity = 122/175 (69.71%), Postives = 151/175 (86.29%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RDRRF+DPEWS NQFFD LKQAYL+ + WAD LV+ A  LD HT+ KA FY++QIA+A++P+NFV TNPEL++ET++SNGENLVRG+ MLAED++EG GDLK+R TDT KFKVGEN+A TPGKV+  N + +LIQY+PTT+TV KRPLL+VPPWINK+YILDLNP+KS +KW
Sbjct:  109 PDQRDRRFRDPEWSENQFFDFLKQAYLITTRWADSLVEGADGLDGHTRQKAAFYIRQIANAISPSNFVLTNPELLRETVSSNGENLVRGMKMLAEDIREGKGDLKLRQTDTTKFKVGENLAVTPGKVIAENALRQLIQYSPTTETVRKRPLLIVPPWINKYYILDLNPEKSLVKW 283          
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Match: A0A857C2T1_9HYPH (Class I poly(R)-hydroxyalkanoic acid synthase n=7 Tax=Stappia TaxID=152161 RepID=A0A857C2T1_9HYPH)

HSP 1 Score: 269 bits (687), Expect = 1.840e-84
Identity = 123/175 (70.29%), Postives = 150/175 (85.71%), Query Frame = 0
Query:    1 PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHKAQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEGHGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRPLLMVPPWINKFYILDLNPQKSFIKW 175
            PD RD+RF DPEWS NQFFD +KQ YL+ S WA+ +V EA+DLD HT+HKA FYVKQIA+AL+P+NFV TNPEL++ETL SNGENLVRG+ +LAED++ G GDLK+R +D  KF+VG N+A TPGKV+ +NDV +LIQY PTT+TVLKRPLL+VPPWINK+YILDL P+KSFIKW
Sbjct:  109 PDPRDKRFGDPEWSENQFFDFVKQLYLITSQWAEQMVVEAADLDEHTRHKADFYVKQIANALSPSNFVLTNPELLRETLESNGENLVRGMKLLAEDIEAGKGDLKIRQSDPTKFRVGTNLALTPGKVIAQNDVRQLIQYEPTTETVLKRPLLIVPPWINKYYILDLTPEKSFIKW 283          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95923.21207.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A068FW61_9ZZZZ2.610e-10181.71Poly(R)-hydroxyalkanoic acid synthase, class I n=1... [more]
A0A838XK56_9HYPH1.220e-8872.57Class I poly(R)-hydroxyalkanoic acid synthase n=2 ... [more]
A0A327JJL5_9HYPH3.420e-8871.43Class I poly(R)-hydroxyalkanoic acid synthase n=1 ... [more]
A0A7X5F1P4_9HYPH5.940e-8671.68Class I poly(R)-hydroxyalkanoic acid synthase n=1 ... [more]
A0A2E6Y9T5_9HYPH4.660e-8569.71Class I poly(R)-hydroxyalkanoic acid synthase n=1 ... [more]
A0NPX8_ROSAI5.500e-8567.63Poly-beta-hydroxybutyrate synthase (Fragment) n=1 ... [more]
A0A7X3LSF7_9HYPH6.570e-8568.00Class I poly(R)-hydroxyalkanoic acid synthase n=2 ... [more]
A0A316C8M9_PSESE6.630e-8569.14Polyhydroxyalkanoate synthase n=2 Tax=Pseudaminoba... [more]
A0A1M7Z9U6_9HYPH1.310e-8469.71Polyhydroxyalkanoate synthase n=1 Tax=Pseudoxantho... [more]
A0A857C2T1_9HYPH1.840e-8470.29Class I poly(R)-hydroxyalkanoic acid synthase n=7 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010941Poly-beta-hydroxybutyrate polymerase, N-terminal domainPFAMPF07167PhaC_Ncoord: 4..175
e-value: 7.2E-80
score: 266.7
NoneNo IPR availablePANTHERPTHR36837FAMILY NOT NAMEDcoord: 1..175
NoneNo IPR availablePANTHERPTHR36837:SF3coord: 1..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95923contigEcto-sp13_S_contig95923:3..527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95923.21207.1mRNA_Ecto-sp13_S_contig95923.21207.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95923 3..527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95923.21207.1 ID=prot_Ecto-sp13_S_contig95923.21207.1|Name=mRNA_Ecto-sp13_S_contig95923.21207.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=175bp
PDSRDRRFKDPEWSRNQFFDTLKQAYLLISNWADDLVDEASDLDPHTKHK
AQFYVKQIASALAPTNFVGTNPELIKETLASNGENLVRGLSMLAEDLQEG
HGDLKVRMTDTRKFKVGENMATTPGKVVMRNDVCELIQYTPTTDTVLKRP
LLMVPPWINKFYILDLNPQKSFIKW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010941PhaC_N