prot_Ecto-sp13_S_contig9588.21201.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9588.21201.1
Unique Nameprot_Ecto-sp13_S_contig9588.21201.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length245
Homology
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: D7G096_ECTSI (Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G096_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 1.040e-113
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163
            MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGP+DTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV
Sbjct:    1 MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPEDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDGTPVVV 163          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A835Z4W6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4W6_9STRA)

HSP 1 Score: 268 bits (685), Expect = 9.080e-88
Identity = 124/153 (81.05%), Postives = 140/153 (91.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 157
            SP+KRRD DMMKLMMSDF VHIPDE SMHDF+VAFPGP +TPY+GGVWKVHV+LP+EYP++SPSIGFENR++HPNVDEMSGSVCLDVINQTWSPMFDLVNIF +F+PQLL+YPNPTDPLN EAAAL++RDPKAY  RIRE VRLHAS  +  D
Sbjct:    3 SPTKRRDMDMMKLMMSDFAVHIPDECSMHDFMVAFPGPANTPYEGGVWKVHVSLPREYPYRSPSIGFENRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFTIFLPQLLAYPNPTDPLNSEAAALMLRDPKAYGARIRESVRLHASRAITFD 155          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A7S2AI60_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AI60_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.190e-79
Identity = 117/152 (76.97%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            +P+KRR  DMMKLMMSD+EV+IPDESSMHDF V F GP DTPY+GGVWK+HVTLP  YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+P LL YPNPTDPLNGEAAAL+MRDP AY  RIRE VR  A+  + L
Sbjct:    6 TPNKRRHQDMMKLMMSDYEVNIPDESSMHDFFVKFEGPPDTPYEGGVWKIHVTLPPAYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEVFLPHLLRYPNPTDPLNGEAAALMMRDPDAYALRIREHVRQFATARIDL 157          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A7S2W0L0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0L0_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.750e-77
Identity = 112/152 (73.68%), Postives = 133/152 (87.50%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 158
            SKR   DMMKLMMSD+EVHIP+E S+H+F V F GP +TPY+GGVWKVHV LP++YPFKSPSIGF+NR++HPNVD++SGSVCLDVINQTWSPMF+LVNIF++F+PQLL YPNPTDPLNGEA AL+MRDP+AY +RIR+ VR  AS  V L G
Sbjct:   20 SKRMHRDMMKLMMSDYEVHIPNEQSVHEFFVKFHGPAETPYEGGVWKVHVMLPRDYPFKSPSIGFKNRIYHPNVDDLSGSVCLDVINQTWSPMFNLVNIFEIFLPQLLRYPNPTDPLNGEAGALMMRDPEAYASRIRDYVRSFASSTVELKG 171          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A2D4C6N9_PYTIN (Ubiquitin-conjugating enzyme E2, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6N9_PYTIN)

HSP 1 Score: 239 bits (611), Expect = 2.750e-77
Identity = 110/153 (71.90%), Postives = 136/153 (88.89%), Query Frame = 0
Query:    4 MSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            MS +KRR+ D+MKLMMS+++VH+ DES  +DF V F GPKDTPY+GG+WK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMFDL+NIF +FIPQLL YPNPTDPLNGEAA+LLM+D +AY+ ++RE VR +AS P+ +
Sbjct:    1 MSSNKRREKDVMKLMMSNYDVHLTDESRANDFHVKFHGPKDTPYEGGLWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFDLLNIFDMFIPQLLRYPNPTDPLNGEAASLLMKDIEAYNAKVREYVRNYASQPIDM 153          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A7S2BA17_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA17_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.130e-76
Identity = 115/154 (74.68%), Postives = 132/154 (85.71%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLDG 158
            +P+KRR  DMMKLMMSD+EV IPDES MHDF V F GP +TPY+ G WK+HVTLP +YPFKSPSIGF+NRMFHPNVD++SGSVCLDVINQTWSPMF+LVNIF+ F+P LL YPNPTDPLNGEAAALLMRDP AY+ RIR+ VR +AS  + L G
Sbjct:   65 NPNKRRHQDMMKLMMSDYEVLIPDESCMHDFFVKFDGPAETPYENGSWKIHVTLPADYPFKSPSIGFKNRMFHPNVDDISGSVCLDVINQTWSPMFNLVNIFEQFLPHLLRYPNPTDPLNGEAAALLMRDPDAYNLRIRDHVRQYASAKIDLVG 218          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A8K1C4X5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4X5_PYTOL)

HSP 1 Score: 233 bits (595), Expect = 7.650e-75
Identity = 106/152 (69.74%), Postives = 134/152 (88.16%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            S +KRR+TD+MKLMMSD+EV + DE+  +DF V F GP +TPY+GGVWK+HV+LPKEYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+LVN+F++FIPQLL YPNP+DPLNGEAA+LLM+D  AY+ +++E VR +AS P+ +
Sbjct:    3 SMNKRRETDVMKLMMSDYEVQLTDETKTNDFHVKFHGPAETPYEGGVWKIHVSLPKEYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELVNVFEVFIPQLLRYPNPSDPLNGEAASLLMKDADAYNAKVKEYVRNYASQPIDM 154          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: H3G861_PHYRM (UBC core domain-containing protein n=31 Tax=Peronosporaceae TaxID=4777 RepID=H3G861_PHYRM)

HSP 1 Score: 233 bits (594), Expect = 1.050e-74
Identity = 105/150 (70.00%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    7 SKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHL 156
            +KRR+TD+MKLMMSD+EVH+ DE+   D  + F GPKDTPY+GG WK+HVTLPK+YPFKSPSIGF NR++HPNVDE SGSVCLDVINQTWSPMF+LVNIF +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+ +++E VR +AS P+ +
Sbjct:    5 NKRRETDVMKLMMSDYEVHLTDETKTSDLDIKFNGPKDTPYEGGSWKIHVTLPKDYPFKSPSIGFMNRIYHPNVDETSGSVCLDVINQTWSPMFELVNIFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNRKVKEYVRNYASQPIEM 154          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: K3WGM6_GLOUD (UBC core domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGM6_GLOUD)

HSP 1 Score: 231 bits (589), Expect = 6.030e-74
Identity = 106/153 (69.28%), Postives = 134/153 (87.58%), Query Frame = 0
Query:    5 SPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHASDPVHLD 157
            S ++RR+TD+MKLMMSD+EV + DES   DF V F GPKD+PY+GG WK+HV+LP+EYPFKSPSIGF NR++HPNVD+MSGSVCLDVINQTWSPMF+L+N+F +FIPQLL YPNP+DPLNGEAA+LLM+D ++Y+N++RE VR +AS   H+D
Sbjct:    3 SMNRRRETDVMKLMMSDYEVQLTDESKTSDFHVKFHGPKDSPYEGGSWKIHVSLPREYPFKSPSIGFVNRIYHPNVDDMSGSVCLDVINQTWSPMFELLNVFDVFIPQLLRYPNPSDPLNGEAASLLMKDAESYNNKVREYVRTYASQ--HID 153          
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Match: A0A7S3XS74_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS74_HETAK)

HSP 1 Score: 235 bits (599), Expect = 1.050e-73
Identity = 109/150 (72.67%), Postives = 131/150 (87.33%), Query Frame = 0
Query:    2 LSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGGVWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMFDLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHAS 151
            LS SPSKRRD D+++LMMSD+EV +PDE  ++DF VAF GP+ TPY+GGVW VHVTLP EYP+KSPSIGF NR+FHPNVD+MSGSVCLDVINQTWSPMFDL+NIF++F+PQLL  PNPTDPLNGEAAALL+RDP+AY  +++  V  +AS
Sbjct:   80 LSSSPSKRRDNDLVRLMMSDYEVTLPDEDKIYDFHVAFHGPEKTPYEGGVWDVHVTLPPEYPYKSPSIGFSNRLFHPNVDDMSGSVCLDVINQTWSPMFDLINIFEVFLPQLLQDPNPTDPLNGEAAALLLRDPEAYRAKVQAYVHRYAS 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9588.21201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G096_ECTSI1.040e-11399.39Ubiquitin-conjugating enzyme type E2 n=1 Tax=Ectoc... [more]
A0A835Z4W6_9STRA9.080e-8881.05Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S2AI60_9STRA1.190e-7976.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2W0L0_9STRA1.750e-7773.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2D4C6N9_PYTIN2.750e-7771.90Ubiquitin-conjugating enzyme E2, putative n=1 Tax=... [more]
A0A7S2BA17_9STRA1.130e-7674.68Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1C4X5_PYTOL7.650e-7569.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3G861_PHYRM1.050e-7470.00UBC core domain-containing protein n=31 Tax=Perono... [more]
K3WGM6_GLOUD6.030e-7469.28UBC core domain-containing protein n=2 Tax=Pythiac... [more]
A0A7S3XS74_HETAK1.050e-7372.67Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 6..151
e-value: 2.3E-46
score: 170.0
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 4..150
NoneNo IPR availablePANTHERPTHR24068:SF287coord: 4..150
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 5..155
e-value: 1.3E-54
score: 185.9
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 8..150
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 13..145
e-value: 1.2E-38
score: 131.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 28..140
score: 33.007
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 76..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9588contigEcto-sp13_S_contig9588:271..3959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9588.21201.1mRNA_Ecto-sp13_S_contig9588.21201.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9588 2..4321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9588.21201.1 ID=prot_Ecto-sp13_S_contig9588.21201.1|Name=mRNA_Ecto-sp13_S_contig9588.21201.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=245bp
MLSMSPSKRRDTDMMKLMMSDFEVHIPDESSMHDFLVAFPGPKDTPYQGG
VWKVHVTLPKEYPFKSPSIGFENRMFHPNVDEMSGSVCLDVINQTWSPMF
DLVNIFKLFIPQLLSYPNPTDPLNGEAAALLMRDPKAYDNRIRECVRLHA
SDPVHLDGTPVVVAPPTPPPPPPPPPPPTPTEQHPTPPPPPQKKRAQRGG
ADQRQQRCVGHVFVGREAAACFRQREREQQQRCRPRQGRRCDDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR023313UBQ-conjugating_AS