prot_Ecto-sp13_S_contig95772.21188.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig95772.21188.1
Unique Nameprot_Ecto-sp13_S_contig95772.21188.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length87
Homology
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 3.460e-26
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
Query:   25 IHEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEV 77
            IHEVVSHL NTHVVLEGPMVSMNRQLPKEHP+HALFAPHVEGTALINWGADE+
Sbjct:  352 IHEVVSHLSNTHVVLEGPMVSMNRQLPKEHPVHALFAPHVEGTALINWGADEL 404          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 105 bits (263), Expect = 1.010e-24
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0
Query:   25 IHEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEV 77
            IH+VVSHLGNTH+VLE PMVSM RQLPKEHPIHALFAPHVEGTALINWGADE+
Sbjct:  280 IHQVVSHLGNTHIVLEAPMVSMYRQLPKEHPIHALFAPHVEGTALINWGADEL 332          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.760e-19
Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   25 IHEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEVNLLRN 82
            +HEVVSHLG+TH+VLEGPMV++NR LPKEHP++ L  PH+EGTALINWGA ++ +  N
Sbjct:  328 MHEVVSHLGSTHIVLEGPMVAVNRCLPKEHPVYDLLKPHMEGTALINWGAQDLLIQPN 385          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A1C0VNU0_9NOSO (Lipoxygenase domain-containing protein n=4 Tax=Nostoc TaxID=1177 RepID=A0A1C0VNU0_9NOSO)

HSP 1 Score: 68.2 bits (165), Expect = 1.950e-11
Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 0
Query:    9 RFLVSFSAVELDVAISIHEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADE 76
             +LV+ S V++   ++ HE+VSHLG TH+ +E   ++  RQLPK HP+  L  PH+EGT LIN+GA +
Sbjct:  391 NWLVAKSVVQM-ADVNYHELVSHLGRTHLFIEPFAIATRRQLPKNHPLRILLEPHLEGTILINYGAHQ 457          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: UPI001683DDF3 (hypothetical protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI001683DDF3)

HSP 1 Score: 65.5 bits (158), Expect = 1.740e-10
Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 0
Query:   26 HEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEV 77
            HE+VSHLG TH+V+E   ++  R+LP+ HP+  L APH++GT LIN+GA ++
Sbjct:  435 HELVSHLGQTHLVIEPFAIATKRKLPRNHPLRILLAPHLQGTILINYGAHKM 486          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: UPI0016877630 (Uncharacterized protein n=2 Tax=Cylindrospermum sp. FACHB-282 TaxID=2692794 RepID=UPI0016877630)

HSP 1 Score: 62.8 bits (151), Expect = 1.510e-9
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   26 HEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGA 74
            HE+VSHLG TH+V+E P V    +LPK HP+  L  PH+EGT LIN+GA
Sbjct:  201 HELVSHLGRTHLVVE-PFVVATNKLPKNHPLKNLLKPHLEGTVLINYGA 248          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: B4WU29_SYNS7 (Lipoxygenase n=1 Tax=Synechococcus sp. (strain ATCC 29403 / PCC 7335) TaxID=91464 RepID=B4WU29_SYNS7)

HSP 1 Score: 60.5 bits (145), Expect = 1.000e-8
Identity = 29/65 (44.62%), Postives = 47/65 (72.31%), Query Frame = 0
Query:   10 FLVSFSAVELDVAISIHEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGA 74
            +L + +AV++  A +IHE ++HL  TH+++E  +V+ +RQLP+ H +H L + H EGT LIN+GA
Sbjct:  421 WLAAKTAVQIADA-NIHEAITHLARTHLLIEPFIVATHRQLPEAHKVHRLLSHHFEGTILINFGA 484          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A6P0NW34_9CYAN (Lipoxygenase domain-containing protein n=1 Tax=Okeania sp. SIO2C2 TaxID=2607787 RepID=A0A6P0NW34_9CYAN)

HSP 1 Score: 60.1 bits (144), Expect = 1.320e-8
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   26 HEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEV 77
            HE++SHLG TH+V+E  +V     LP+ HP+  L  PH EGT LIN+GA  +
Sbjct:  114 HELISHLGRTHLVVEPFIVPTYNNLPENHPLRNLLIPHFEGTVLINYGAHAI 165          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A4Q6FMI2_9PROT (Lipoxygenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6FMI2_9PROT)

HSP 1 Score: 60.1 bits (144), Expect = 1.350e-8
Identity = 28/58 (48.28%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   26 HEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEVNLLRNK 83
            HE+VSHLG TH+++E  +++  RQL   HPI+ L +PH EGT LIN  AD   +  N+
Sbjct:  275 HELVSHLGTTHLLMEPIVIATRRQLHASHPIYNLLSPHFEGTMLINGLADSSLIQENQ 332          
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Match: A0A6P0TXZ7_9CYAN (Lipoxygenase n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0TXZ7_9CYAN)

HSP 1 Score: 60.1 bits (144), Expect = 1.370e-8
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:   26 HEVVSHLGNTHVVLEGPMVSMNRQLPKEHPIHALFAPHVEGTALINWGADEV 77
            HE++SHLG TH+V+E  +V     LP+ HP+  L  PH EGT LIN+GA  +
Sbjct:  382 HELISHLGRTHLVVEPFIVPTYNNLPENHPLRNLLIPHFEGTVLINYGAHAI 433          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig95772.21188.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K920_9PHAE3.460e-2694.34Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
A0A6H5KD72_9PHAE1.010e-2490.57Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
D8LBX4_ECTSI3.760e-1967.24Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A1C0VNU0_9NOSO1.950e-1147.06Lipoxygenase domain-containing protein n=4 Tax=Nos... [more]
UPI001683DDF31.740e-1051.92hypothetical protein n=1 Tax=Oscillatoria sp. FACH... [more]
UPI00168776301.510e-959.18Uncharacterized protein n=2 Tax=Cylindrospermum sp... [more]
B4WU29_SYNS71.000e-844.62Lipoxygenase n=1 Tax=Synechococcus sp. (strain ATC... [more]
A0A6P0NW34_9CYAN1.320e-850.00Lipoxygenase domain-containing protein n=1 Tax=Oke... [more]
A0A4Q6FMI2_9PROT1.350e-848.28Lipoxygenase n=1 Tax=Proteobacteria bacterium TaxI... [more]
A0A6P0TXZ7_9CYAN1.370e-850.00Lipoxygenase n=2 Tax=unclassified Okeania TaxID=26... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013819Lipoxygenase, C-terminalPRINTSPR00087LIPOXYGENASEcoord: 26..43
score: 41.51
coord: 46..66
score: 44.83
IPR013819Lipoxygenase, C-terminalPFAMPF00305Lipoxygenasecoord: 23..75
e-value: 7.0E-11
score: 41.3
IPR013819Lipoxygenase, C-terminalPROSITEPS51393LIPOXYGENASE_3coord: 1..87
score: 14.349
NoneNo IPR availableGENE3D1.20.245.10coord: 20..85
e-value: 2.8E-16
score: 61.5
NoneNo IPR availablePANTHERPTHR11771:SF97coord: 24..74
IPR000907LipoxygenasePANTHERPTHR11771LIPOXYGENASEcoord: 24..74
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILY48484Lipoxigenasecoord: 24..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig95772contigEcto-sp13_S_contig95772:62..322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig95772.21188.1mRNA_Ecto-sp13_S_contig95772.21188.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig95772 62..322 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig95772.21188.1 ID=prot_Ecto-sp13_S_contig95772.21188.1|Name=mRNA_Ecto-sp13_S_contig95772.21188.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=87bp
MQAIDNFTRFLVSFSAVELDVAISIHEVVSHLGNTHVVLEGPMVSMNRQL
PKEHPIHALFAPHVEGTALINWGADEVNLLRNKLGSP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013819LipOase_C
IPR000907LipOase
IPR036226LipOase_C_sf