prot_Ecto-sp13_S_contig9576.21186.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9576.21186.1
Unique Nameprot_Ecto-sp13_S_contig9576.21186.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length242
Homology
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A6H5JRL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL5_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 3.980e-62
Identity = 148/196 (75.51%), Postives = 153/196 (78.06%), Query Frame = 0
Query:   49 YNRRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGG-YNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAGGGFERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWECPSCGYICFKSRMECNRCHTPKPIG---VGGGG 240
            YNRRPGD ECPSCG NC ASRV CNRCQTPKP GAGGG YGERG       XXXXXXXXXXXX   XXXXXXXXXX   YNRRPGDWDCPSCG+HCFASRVVC+RCPTPRPE AGGGFERG    XXXXXXXXXXXXX        XXXXXX  Y + PG W+CPSCGY CF SRMECNRCHTPKP+G    GGGG
Sbjct:   49 YNRRPGDWECPSCGNNCFASRVECNRCQTPKPAGAGGGGYGERGXXXXXXXXXXXXXXXXXXXGYSXXXXXXXXXXXXXYNRRPGDWDCPSCGNHCFASRVVCNRCPTPRPEGAGGGFERGXXXXXXXXXXXXXXXXX-------XXXXXXXXXYSKRPGDWDCPSCGYNCFASRMECNRCHTPKPVGGVAPGGGG 237          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: D8LIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ0_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 6.060e-29
Identity = 112/186 (60.22%), Postives = 117/186 (62.90%), Query Frame = 0
Query:   50 NRRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAGGGFERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWECPSCGYICFKSRMECNRCHTPKPIG 235
            N+RPGD ECPSCG NC ASR  CNRCQTPKP GAGG              XXXXXX XXXXXXX XXXXXXXXXX     R GDW CPSCG++CFA R  C+RC TP+P   GG           XXXX XXXXXXXX      XXXXXX       G W CPSCG ICF  R ECNRC TPKP G
Sbjct:   47 NKRPGDWECPSCGNNCFASRSECNRCQTPKPAGAGGXXX---------XYXXXXXXYXXXXXXXYXXXXXXXXXXXXXXXREGDWTCPSCGNNCFAFRQECNRCQTPKPGGEGGXXXX-------XXXXYXXXXXXXXXXXXXXXXXXXXXXXXXREGDWTCPSCGNICFAFRNECNRCQTPKPNG 216          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 3.790e-20
Identity = 109/179 (60.89%), Postives = 113/179 (63.13%), Query Frame = 0
Query:   57 ECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAGGGFERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWECPSCGYICFKSRMECNRCHTPKPIG 235
            ECPSCG NC ASR  CNRCQTPKP G         G G     XXXXXXXXXXXXXXXXXXXXXXXXXG    R GDW CPSCG++CFA R  C+RC TP+P   G          XXXXXXXXXXXXXXX      XXXXX        G W CPSCG  CF  R ECNRC TPKP G
Sbjct:    9 ECPSCGNNCFASRSECNRCQTPKPAGX---XXXXXGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----REGDWACPSCGNNCFAFRQECNRCQTPKPGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------DGDWACPSCGNNCFAFRNECNRCQTPKPSG 174          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: D7FHH5_ECTSI (Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH5_ECTSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.020e-16
Identity = 109/141 (77.30%), Postives = 111/141 (78.72%), Query Frame = 0
Query:    1 SYYNYGGGHGDGEEGVSXXXXXXXXXXXXXXSGDWGXXXXXXXXXXXXYNRRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGE-------RGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDW 134
            SYYN GGGHG   EGVSXXXXXXXXXXXXXX     XXXXXXXXXXXXYNRRPGD ECP+CG NC ASRV CNRCQTPKPVGAGG  YGE       +G G      XXXXXXXXXXXXXXXXXXXXXXXX GYNRRPGDW
Sbjct:    2 SYYNDGGGHGGAGEGVSXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXYNRRPGDWECPNCGNNCFASRVECNRCQTPKPVGAGGXXYGEXXXXXXXQGGG------XXXXXXXXXXXXXXXXXXXXXXXXXGYNRRPGDW 135          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A7S2STL9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STL9_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 4.950e-15
Identity = 67/118 (56.78%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   50 NRRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAG--GGF 165
            +RR GD +CPSCG    AS+  C +CQTP+P G GG  YG               XXXXXXXXXXXXXXXXXXXX   +RR GDWDCPSCG+HCFASR  C +C TP P   G  GG+
Sbjct:   37 DRRAGDWDCPSCGALVFASKSNCYKCQTPRPDGGGG--YGXX-------------XXXXXXXXXXXXXXXXXXXXXXXDRRAGDWDCPSCGAHCFASRSTCFKCGTPNPGPGGPDGGY 139          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A7S2SUK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUK3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.380e-12
Identity = 66/114 (57.89%), Postives = 73/114 (64.04%), Query Frame = 0
Query:   50 NRRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAGG 163
            NRRPGD +C  CG    ASR  C +C  P+  G G               XXXXXXXXXXXXXXXXXXXXXXXXX    RRPGDWDCPSCG+H FAS+  C +C TPRP+  GG
Sbjct:   27 NRRPGDWDCTKCGAMNFASRNSCFKCHEPRADGGG--------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPGDWDCPSCGAHVFASKSNCFKCGTPRPDGGGG 126          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A7S0F4W8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F4W8_9CRYP)

HSP 1 Score: 72.4 bits (176), Expect = 3.370e-11
Identity = 73/208 (35.10%), Postives = 92/208 (44.23%), Query Frame = 0
Query:   54 GDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAG-GAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAG---------GGFER---------GGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGG---------YKRWPGVWECPSCGYICFKSRMECNRCHTPKP 233
            GD  CP C     AS+  C +C+TP+PV +GGG       G G+ +Q                              RPGDW CP CGS+ FAS+++C +C TP+P+ +          G F R              XXXXXXXXXXXXXXX G G        GG         +   PG W CP C    + SR EC +C TP+P
Sbjct:   94 GDWACPRCFATVFASKRECYKCRTPRPVESGGGGAPPDHPGPGSSFQVP----------------------------RPGDWQCPGCGSNVFASKMICYKCRTPKPDGSSSQGYYEDTTGKFARREXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMGYGDGRVSFGGRAYDIHPPLHTSRPGDWVCPQCSAQVYASRNECFKCRTPRP 273          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A1X2HXZ0_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2HXZ0_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 3.410e-11
Identity = 60/193 (31.09%), Postives = 70/193 (36.27%), Query Frame = 0
Query:   52 RPGDSECPS--CGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRC-------PTPRPESAGGGFERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWEC--PSCGYICFKSRMECNRCHTPKP 233
            RPGD  CP+  CG    ASR+ C RC T  P  A   SYG    G   +                          GG+  R GDW CP+C SH FASR  C +C       P+  P S  GG   GG+ G                                  G W C  P CG+  F  R  C RC+TP P
Sbjct:  592 RPGDWYCPNAVCGFQNFASRMACYRCHTANPNPAPQQSYGGSTGGAPPFGYDGGESNSYYGAPNPAPGNVMAPGTGGHGFRAGDWYCPACNSHNFASRFHCLKCRTAKPANPSLNPPSTYGGTGTGGFRGTPSIKS----------------------------GDWVCGNPECGFHNFAKRTFCGRCNTPYP 756          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A1X2IYC0_9FUNG (Uncharacterized protein n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IYC0_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 3.790e-10
Identity = 71/208 (34.13%), Postives = 82/208 (39.42%), Query Frame = 0
Query:   52 RPGDSECPS--CGKNCPASRVGCNRCQTPKP------------VGAGG--GSYG-ERGAGGAGYQXXXXXXXXXXXXXXXXXXXXXXXXXGGYNRRPGDWDCPSCGSHCFASRVVCSRCPTPRPESAG-------GGFERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWECPS--CGYICFKSRMECNRCHTPKP 233
            RPGD  CP+  CG    ASR+ C RC TP P             GAGG  GSYG + G GG          XXXXXXX            GG+  R GDW CPSC SH FASR  C +C T +P +          G   GG+ G                                  G W C +  CG+  F  R  C +CH P P
Sbjct:  586 RPGDWYCPNPPCGFQNFASRMSCYRCHTPNPNXXXQPNYGGPNAGAGGSHGSYGYDNGPGGG---APYGGVXXXXXXXNLPPGNTMAPGTGGHGFRVGDWYCPSCNSHNFASRFQCLKCHTAKPYNPSQPTPPPYAGANAGGFRGPPPMMKN---------------------------GDWVCRNSGCGFHNFAKRTFCGKCHAPNP 763          
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Match: A0A830HUW3_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HUW3_9CHLO)

HSP 1 Score: 67.4 bits (163), Expect = 1.900e-9
Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 0
Query:  130 RPGDWDCPSCGSHCFASRVVCSRCPTPRPES---AGGGF----ERGGWSGXXXXXXXXXXXXXXXWGSGRTXXXXXXGGYKRWPGVWECPSCGYICFKSRMECNRCHTPKP 233
            +PGDW CP CG+H FASR  C  C  PRP     AGGG     + GG  G  XXXXXXXXXXXX       XXXXX G     PG W C  C Y  F SR +C +C+TP+P
Sbjct:  207 KPGDWSCPQCGAHNFASRQACFSCQGPRPMGVPMAGGGAGAVQQHGGGYGVGXXXXXXXXXXXX------XXXXXXMGAPNFKPGDWICTGCSYHNFASRFQCFKCNTPRP 311          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9576.21186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRL5_9PHAE3.980e-6275.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ0_ECTSI6.060e-2960.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L8L8_9PHAE3.790e-2060.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHH5_ECTSI1.020e-1677.30Ewing sarcoma breakpoint region 1b n=1 Tax=Ectocar... [more]
A0A7S2STL9_9STRA4.950e-1556.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SUK3_9STRA5.380e-1257.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S0F4W8_9CRYP3.370e-1135.10Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A1X2HXZ0_9FUNG3.410e-1131.09Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
A0A1X2IYC0_9FUNG3.790e-1034.13Uncharacterized protein n=1 Tax=Absidia repens Tax... [more]
A0A830HUW3_9CHLO1.900e-951.35Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 207..231
e-value: 8.5E-6
score: 35.3
coord: 54..78
e-value: 0.081
score: 20.5
coord: 132..156
e-value: 1.4E-4
score: 31.2
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 207..233
e-value: 3.2E-6
score: 26.4
coord: 130..158
e-value: 7.3E-7
score: 28.4
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 205..234
score: 9.123
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 130..159
score: 10.218
NoneNo IPR availableGENE3D4.10.1060.10coord: 201..236
e-value: 1.9E-8
score: 35.3
NoneNo IPR availableGENE3D4.10.1060.10coord: 123..166
e-value: 8.4E-11
score: 42.8
coord: 45..86
e-value: 1.0E-5
score: 26.6
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 120..234
coord: 43..162
NoneNo IPR availablePANTHERPTHR23111:SF40T1N15.19coord: 120..234
coord: 43..162
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 122..160
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 199..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9576contigEcto-sp13_S_contig9576:2282..3352 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9576.21186.1mRNA_Ecto-sp13_S_contig9576.21186.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9576 2282..3352 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9576.21186.1 ID=prot_Ecto-sp13_S_contig9576.21186.1|Name=mRNA_Ecto-sp13_S_contig9576.21186.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=242bp
SYYNYGGGHGDGEEGVSSGGGGGGGGGGGGGSGDWGGEGGGGRGGGGGYN
RRPGDSECPSCGKNCPASRVGCNRCQTPKPVGAGGGSYGERGAGGAGYQG
GGGRGYGGGGGYGGGGGYSGGSGGGGYNRRPGDWDCPSCGSHCFASRVVC
SRCPTPRPESAGGGFERGGWSGGYKGGGGYGGGGGGGWGSGRTGGVRGGG
GYKRWPGVWECPSCGYICFKSRMECNRCHTPKPIGVGGGGHG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf