prot_Ecto-sp13_S_contig956.21168.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig956.21168.1
Unique Nameprot_Ecto-sp13_S_contig956.21168.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length1279
Homology
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: D7FMK4_ECTSI (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMK4_ECTSI)

HSP 1 Score: 2207 bits (5718), Expect = 0.000e+0
Identity = 1139/1280 (88.98%), Postives = 1164/1280 (90.94%), Query Frame = 0
Query:    1 MAATPSGEDVEGRLLAPLSTLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLWQREFSVGLGGTGRDVGVGGVRVGEAPLRREQVATGSRLKAAEAEDSLPPPPVGCRYLRVHRPMDRNSQIVASLGPPGELLERRGLGSDMGDHSVTTDEETTAVDSLLTSSVQIYPGKLSCARMLLAAARLFASQKINTLAADVESYAAQLGTCVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCVSRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSLPTQT--NGEQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDTNVIDAGAEFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRILPRRTSAIELTRAERAATIGQVPTAASVSAAFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGPGANGVKASSEGNVLEETGEMLSFFLEVDITGNLDVEHTVVSATLPTAGQARNSLRPVVGETYQLFPCQPLSGSRCGSLDADLLPSELPPAVGNKRSASCLDADYPRGANGIAKGVHDGLCPTTLHAAVGTVGEASQTQLCTAVQMCNRFVPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEETGLAVTNGVVQEQLPLAHHIEIRGVRQEGIESSSTTRMAQGKHIRFRFPPPFSVHAMCRSFALAGEGLTIMQTLATQASKMRQTGCEGAGYGVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHSPTCPAAMRELEASVRKHRDLSALLHGLSRTVPVMAEVSRVLPGVGSAAGMNGDRSPARGEFVLKAVTPARFVLSKSPLGGRRSQSKPALTLAVEAGGQVRVSTPGGKDVVADTGALRRLLLEWIASTSE 1278
            M  TPSGEDVEGRLLAPLSTLLASELCLRQTD AFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIV+RVDRAIRLALLRRGGVP+QFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARW LLG+TLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDA PRPNALLAAYQVCHD+CCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQ                                                                           IVA+LGPPGE LE RGLGSD+GDHSVTTDEET+AVDSLLTSSVQIYP KLSCARMLLAAAR+FASQK+NTLAADVESYAAQLG CVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASC+SRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRS+PTQ   NGEQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTD N IDAG EFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRIL R TSAIELTRAERAATIGQVPTAAS  A FRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVG GANGVKASSEGNVLEETGE+LSFFLEVDITGNLDVEHTVVSATLPTAG+AR SLRPVVGETY+LFPCQPLSGSRCGSLDADLLPS+ PPAVG KRSASCLDA Y +GA GI  GVHDGLCPTTLHAAVGTVGEASQTQLCTAVQMCNRFVPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDE+ GLAVT G+V EQLPLA HIEI GVRQEGIESSSTTRMAQGKH+RFRFPPPFSVHAMCRSFALAGEGLT+MQTLA QASK+RQTGCE AGY VVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPH+PTCPAAMRELEASVRKHRDL+ALLHGLSRTVPV+AEVSRVLPGVGSAAGMNGDRSP+RGEFVL AVTPARFVLSKSPLG RR QSKPALTLAVEAGGQVRVSTPG KDVVADTGALRRLLLEWIASTSE
Sbjct:    1 MEGTPSGEDVEGRLLAPLSTLLASELCLRQTDRAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVLRVDRAIRLALLRRGGVPNQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWALLGVTLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDANPRPNALLAAYQVCHDLCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQ---------------------------------------------------------------------------IVAALGPPGEFLEGRGLGSDVGDHSVTTDEETSAVDSLLTSSVQIYPDKLSCARMLLAAARIFASQKVNTLAADVESYAAQLGACVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCISRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSIPTQRARNGEQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGRTDANAIDAGTEFPRLDGSDTLRSSVRLGQFRENGVLLSEAWRKRTRNFRILRRGTSAIELTRAERAATIGQVPTAASAGAGFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMASRSTRWRTDRGVGSGANGVKASSEGNVLEETGEVLSFFLEVDITGNLDVEHTVVSATLPTAGRARKSLRPVVGETYKLFPCQPLSGSRCGSLDADLLPSKPPPAVGTKRSASCLDAGYSQGAIGITTGVHDGLCPTTLHAAVGTVGEASQTQLCTAVQMCNRFVPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHCAVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFIWAVPAKDEDKGLAVTRGIVHEQLPLAQHIEILGVRQEGIESSSTTRMAQGKHVRFRFPPPFSVHAMCRSFALAGEGLTVMQTLAAQASKLRQTGCEAAGYSVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHAPTCPAAMRELEASVRKHRDLNALLHGLSRTVPVLAEVSRVLPGVGSAAGMNGDRSPSRGEFVLTAVTPARFVLSKSPLGERRLQSKPALTLAVEAGGQVRVSTPGRKDVVADTGALRRLLLEWIASTSE 1205          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A836CA29_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA29_9STRA)

HSP 1 Score: 243 bits (619), Expect = 5.600e-62
Identity = 207/684 (30.26%), Postives = 294/684 (42.98%), Query Frame = 0
Query:   17 PLSTLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSG-NHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIF--ELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREGESITAPVRDFRQQRYLHEVIQKAMDVHADGDAKPRPNA--------------------------------------------------------------LLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLWQREFSVGLGGTGRDVGVGGVRVGEAPLRREQVATGSRLKAAEAEDSLPPPPVGCRYLRVH--RP--MDRNSQIVASLGPPGELLERRGLGSDMGDHSVTTDEETTAVDSLLTSSVQIYPGKLSCARMLLAAARLFASQKINTLAADVESY--AAQLG-----TCVPRVTTVGGLSAYICPWGGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCVSRLREALNLLPLTDSQSLGESIASTLSAGRSVLQKRSLPTQTNGEQDLRQQHVRRCMGESFGLLRRGELEHTFRCAFGVVPHLRWQALLGR 624
            P+ ++ AS L     + A+ D++ L++ LS  N D+RRE++L Y+RS RARFLKAYA + WL+   H EL+A+A  ALA A                  GGLFGARQR +DVP A+DVL  G YP LP GI +CG D D   +   + P  R  ++ RVDRA+RLALL R   P+ FTS  V+ G L L V  EFEL +TL+ E  DA W L G+ + V +R GE+I  P  D RQ+ YL  ++Q+A+D  AD  A P   A                                                              LL AY++ HD C    LE+L  QAQ LA R G  W   L  +  + ++VLD+ +W++E+   L                 P        G+ +          PPP   R++RVH  RP   D  + I   LGP                          A ++   +++ I    LS +R++  A R F  +K+  LA DV +    A  G     + V      GG +  +   GGG ++++ D+++GR +V           +   + L EAL L P                AGR+  Q R++              +R  +  +  +      E    C  G+ P  RW ALLGR
Sbjct:   17 PIPSIPASYLVHLLVEKAYDDLQSLSSALSMENLDTRREEVLAYVRSYRARFLKAYAAVRWLTEFGHRELIADAREALAVAHXXXXXXXXXXXXXXXXXGGLFGARQRPFDVPAALDVLGSGTYPRLPLGIPWCGMDQDESSLVPTDTPEQRASVLARVDRALRLALLVREPFPAGFTSRAVRRGCLYLEVAHEFELRLTLEGEGGDAPWVLRGLDIRVASRAGEAIAPPPVDLRQRVYLQNLLQRALDAAADS-ASPGGTAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMADASEVVPGRPLLTAYRLAHDFCMGAQLELLSVQAQALA-RPGAPWHGCLRAVLDRAARVLDIIVWEQEYGPAL-----------------PTAAPPPPRGAPVNGV-------PPPAQGRFIRVHVQRPETADAEAHIRIQLGPG-------------------------AAEAATEAALHIDAAALSASRLVRDAVRTFTRRKLAVLAPDVAAALRGAPAGGXXXXSGVRARLHAGGRALRVAARGGGALDIAADLRTGRCVVLSERAEARPDASGAHAALLEALALPPGA--------------AGRAHAQGRAM--------------LRARLMAALRMAALDAAEAAAACGLGLEPQWRWGALLGR 621          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A3M6VE54_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VE54_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.200e-31
Identity = 101/327 (30.89%), Postives = 167/327 (51.07%), Query Frame = 0
Query:   19 STLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLG-ITLLVQAREGE-----SITAPVRDFRQQ-------RYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLWQR 332
            +++ ASEL  R  D ++ D R L + L  +  + RRE LL +++++R RF +  A++ W       L+    + L +    R  ++   D+ FFMH  L  A++R YD+  AVDVL GG Y  LP  I+     + PR + E+  N +E  M V   IR  L+    +P Q ++  ++ G +T  V GEFE+++T+Q +  DA+W ++  IT L + +  E     + T+ +R  R          +L  ++Q+AM+       KP     + A+ V    C S+ L+IL +Q  KL T   G W  ++ +  H+D  VLD+C W +
Sbjct:   10 TSVKASELVHRAVDKSYEDFRTLMHQLPTMREEKRREPLLTHLQTSRKRFAQLLAVLKW--SVQSPLLQQCDSLLQQTERYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLRLPTIIKNV---MFPRELPEV--NTDEAAMEVADIIRFRLIGEE-IPEQVSNIKLEGGFVTCQVEGEFEIVLTIQGKENDAKWRVISVITALTEPKAFEDHAQAASTSALRIIRTNSPSAAHYNHLKNLVQRAMNK----SEKP----FVDAFVVMRQFCSSLALQILASQG-KLLTE--GRWKNRIMIKHHRDQNVLDICYWPK 317          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A1V9ZMZ3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMZ3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.890e-30
Identity = 117/406 (28.82%), Postives = 183/406 (45.07%), Query Frame = 0
Query:   25 ELCLRQTDHAFHDIRRLANILSRVNH-DSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREGESITAPVRDFRQQR-----------YLH--EVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLW-AAQLAVMFHKDSQVLDLCLWQREFSVGLGGTGRDVGVGGVRVGEAPLRREQVATGSRLKAAEAEDSLPPPPVGCRYLRVHRPMDRNSQIVASLGPPGELLERRGL 415
            +L  R  D ++   R LA+ L  VN  D RRE  L ++   R+ F K   +  W       L A  +  L  A+  ++Q++   D+ FF+H  L  A++R YD+P AVDVL GG Y  LPK I Y    + P+ + E+  + ++ +  ++  IR  L+    +PS FT   V+ G +   V+GEFE++ TL  +  D+ W L+ I  ++     +    P+      R           Y+H   ++QK M+       KP     +AA  V  D CCS+ L+IL AQ Q L       W  + +  ++H D QVLD+C W       +  T            EA     ++A   + K  EAE +LP  P     +R++     +  +   L PP     R+ L
Sbjct:   14 DLVARCVDKSYEGFRALAHGLPGVNKADERREQTLKHLADTRSLFEKLLVLTRW--SVQSPLAAQCAELLKTAKLFQDQLNESNDRLFFLHADLNRAKERNYDLPTAVDVLYGGSYTRLPKIINYA---MHPKEMPEV--DEDKAIQEMEDIIRFRLIEEE-IPSTFTRIDVEGGFVVAQVDGEFEIVFTLNGKESDSLWRLVAINTVLTDLTAQEKYKPLASTNTLRIIKANAPTELHYMHMRNLVQKCMNK----SDKP----FVAACDVMRDFCCSLSLQILVAQGQLLTD---ARWKGSNVEFIYHADKQVLDICYWSAFCRPAVLST------------EAVQLAAEMA--DKFKKPEAE-ALPDYPASSLCVRLYSDAQHHDLLSVQLYPPPAPELRQAL 385          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: M4BI28_HYAAE (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BI28_HYAAE)

HSP 1 Score: 138 bits (348), Expect = 2.850e-29
Identity = 95/327 (29.05%), Postives = 160/327 (48.93%), Query Frame = 0
Query:   19 STLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREG------ESITAPVRDFRQQ-------RYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLWQR 332
            +++ ASEL  R  D ++ D R L   L  +  + RRE LL +++S R RF +  A++ W       L+    + L    + R  ++   D+ FFMH  L  A++R YD+  AVDVL GG Y  LP  I+     + PR + E+    E+   +V   IR  L+    +P Q ++  ++ G +T    GEFE+++TLQ E  DA+W ++ +   +   +        + T+ +R  R          +L  ++Q+AM+       KP     + A+ V  + C S+ L+IL  Q + L   + G W  ++ +  H+D  VLD+C W +
Sbjct:   10 TSIKASELVHRAVDKSYEDFRSLMFHLPTLREEERREPLLAHLQSARKRFAQLLAVLKW--SVQSPLLHQCDSLLQHTSAYRNNVNETNDRLFFMHADLNRAKERRYDLSTAVDVLYGGSYLWLPTIIKNA---MFPRELPEVEI--EQAATKVTDLIRFRLIE-AEIPDQVSNIKLEGGFVTCQAQGEFEIVLTLQGEENDAKWRVISVNTALTDPQAFGDHARAASTSALRIIRTNAPSAAHYNHLKNLVQRAMNK----SEKP----FVDAFVVMREFCSSLALQILALQGKLL---MEGRWKNRIMITHHRDQNVLDICYWPK 317          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A067CQG6_SAPPC (Mediator of RNA polymerase II transcription subunit 14 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CQG6_SAPPC)

HSP 1 Score: 138 bits (347), Expect = 3.370e-29
Identity = 116/398 (29.15%), Postives = 182/398 (45.73%), Query Frame = 0
Query:   25 ELCLRQTDHAFHDIRRLANILSRV-NHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELP-ANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGI-TLLVQAREGESI-----TAPVRDFR-----QQRYLH--EVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLW-AAQLAVMFHKDSQVLDLCLWQREFSVGLGGTGRDVGVGGVRVGEAPLRREQVATGSRLKAAEAEDSLPPPPVGCRYLRVHRPMDRNSQIVASLGPP 406
            +L  R  D ++ + R LA+ L  V   + RRE  L ++   R+ F K   +  W       L A  +  L  A+   +Q++   D+ FF+H  L  A++R YD+  A+DVL GG YP LPK I Y    + P+   E+P  + ++ +  +D  IR  L+    +PS FT   V+ G +   V GEFE++ TL  +  D+ W L+ I T+L  A   E       T  +R  +     +  Y+H   ++QK M+  +           +AA  +  D CCS+ L+IL AQ   L       W ++ +  ++H D QVLD+C W                   V   EA     ++A   + K  E+E SLPP P     +R++     +  +  SL PP
Sbjct:   14 DLVARCVDKSYENFRGLAHGLGGVAKAEERREQALKHLADTRSLFEKLLVLTRW--SVQSPLAAQCAELLKTAKLFTDQLNESNDRLFFLHADLNRAKERTYDLATAIDVLYGGTYPRLPKLISYA---MHPK---EMPDVDEDKAIQEMDDIIRFRLIEEE-IPSTFTRIDVEGGFVIAHVEGEFEIVFTLNGKESDSLWRLVAINTVLTDAAATEKYKTLASTNTLRIIKANAPTELHYMHMRNLVQKCMNKSSA--------PFVAACDIMRDFCCSLSLQILVAQGHLLTD---SRWKSSNVEFVYHADKQVLDICYWSSFCRPA------------VLTTEAAQLAAEMA--DKFKKPESE-SLPPYPTASLCVRLYSDPKHHDLLSLSLHPP 376          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: F0W2P3_9STRA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2P3_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.150e-27
Identity = 93/327 (28.44%), Postives = 158/327 (48.32%), Query Frame = 0
Query:   20 TLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGI-TLLVQAREGESITAPVRDFR----------QQRYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLWQREFS 335
            T+  SEL  R  D  + ++R L   LS    + R + LL +++  + +  +  ++  W S  H  ++  +S  L  A S R Q +   D+ FFMH  L  A++R+YD+  A+DVL  G Y  LP  IE     + PR     P N  +    ++  IR  L++   +P QFTS ++ +G +  T +G+FE++ TLQ  + DA W ++ + T+L      +        FR          Q  ++  ++Q A++ HA+          L A+++  + C S+ L IL +QAQ L   + G W  +L+ ++H+   +LD   W    S
Sbjct:   11 TIKTSELLHRGVDQQYENLRTLVQQLSTSREEERTQPLLTFLQQCKQQCTQLLSLTFW-SHRHANVLKRSSQILQHAESYRNQTNETNDRLFFMHANLDRAKERMYDLSTAIDVLYKGSYLRLPSVIERA---MYPREFP--PHNLTKTADTLNNLIRYRLIQ-SNIPKQFTSISLDHGFVYFTCSGQFEIVFTLQGLQPDAVWHVVRVHTILTDVNALQQYQTHSSAFRIFQNSAPNPTQYAHIRNLLQTALN-HAE-------EPFLEAFKLMKEFCASLALHILRSQAQLL---LDGPWKHRLSTVYHRQGNMLDFMYWPHRCS 319          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: D8RD42_SELML (Mediator of RNA polymerase II transcription subunit 14 n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RD42_SELML)

HSP 1 Score: 103 bits (256), Expect = 2.590e-18
Identity = 83/292 (28.42%), Postives = 139/292 (47.60%), Query Frame = 0
Query:   12 GRLLAPLSTLLASELCLRQTDHAFHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREGESITAPVRDFRQQRY-LHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKL 302
            G+   PLS L+      R  + A+  ++ +       +   R+  LL +I   R R L+   I  W       LV      +    +         D  F++H  L  +R  +YDV  A+DVL  G +P +PK IE    D++ +P+ E    ++ ++ ++D  +R  LL    VP +FTS +V++G LTL V+GEFE+ +TL      + W +L + LLV    GES + P +    QR+ L + +++ M       A   P  ++  Y V H+ C ++V++ L  Q + L
Sbjct:    4 GQETVPLSLLVK-----RAAEAAYTGLKEVCEAAPEQSDAERKISLLKFILKTRQRLLRLLVICKWC--RQIPLVERCQQLMGTLSNHDMSFTQAADSMFYLHESLQQSRAPMYDVASAMDVLFTGGFPRMPKCIE----DLNVQPVLE-GWKKDNVLQKLDTLLRSKLLDIA-VPKEFTSVSVRDGRLTLRVDGEFEVELTLGYRGNASLWRVLHLKLLV----GES-SRPAKFSDMQRFALSDDLERRMS------ALENPFGII--YTVLHEFCAALVMDTLWRQVRAL 269          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A368FEX2_ANCCA (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Ancylostoma caninum TaxID=29170 RepID=A0A368FEX2_ANCCA)

HSP 1 Score: 97.8 bits (242), Expect = 7.360e-17
Identity = 90/310 (29.03%), Postives = 141/310 (45.48%), Query Frame = 0
Query:   35 FHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPS-QFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQARE---GESITAPVRDFRQQRYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLW-QREFSVGLG 339
            +H+I  L+ +L +     R+  L+ +  S R  F+K  A++ W+  +       A   L + +SQ   I+            L  AR   + V  AVDVL  G Y HLP  I+        +P    P +   +++R+++ ++  + +     S +     +KNG+L LTV GEFE+ +T+  ERE   WTLL I +LV+  E   G  +  P+    Q   LH V+Q  MDV     AK   N +   Y   H    S+ L++L  QA +LA   G L    +   +    +VL +  W QR    G+G
Sbjct:  240 YHEITVLSELLPKKLDGDRKISLVQFAHSTRMLFVKLLAVVKWVKSSKKFESCAAICYLLDQQSQYF-IETADRLVTISREELVMARLPAFQVTAAVDVLTQGTYLHLPTIIQER---FTLKPKIS-PIDEANVLLRLNQVLQYRISKVASTLSPRIKGIVIKNGMLILTVPGEFEVNLTVLGEREQTPWTLLNIKMLVEDYEIGYGAQLVHPL----QLHMLHTVLQSRMDV-----AK---NPINEVYNFLHTFAQSLQLDVLFCQASQLAA--GRLRNKIVIEKYDPKERVLSIGYWVQRITKKGIG 530          
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Match: A0A0B1T965_OESDE (Mediator of RNA polymerase II transcription subunit 14 n=1 Tax=Oesophagostomum dentatum TaxID=61180 RepID=A0A0B1T965_OESDE)

HSP 1 Score: 97.8 bits (242), Expect = 8.540e-17
Identity = 91/310 (29.35%), Postives = 144/310 (46.45%), Query Frame = 0
Query:   35 FHDIRRLANILSRVNHDSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQREQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCGGDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPS-QFTSHTVKNGVLTLTVNGEFELMVTLQAEREDARWTLLGITLLVQARE---GESITAPVRDFRQQRYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQKLATRVGGLWAAQLAVMFHKDSQVLDLCLW-QREFSVGLG 339
            +H+I  L+ +L +     R+  L+ +  S R  F+K  A++ W+  +       A   L + +SQ   I+            L  AR   + V  AVDVL  G Y HLP  I+     + P+      AN   +++R+++ ++  + +     S +     +KNG+L LTV GEFE+ +T+  ERE   WTLL I +LV+  E   G  +  P+    Q   LH V+Q  MDV     AK   NA+   Y   H    S+ L++L  QA +LA   G L    +   ++   ++L +  W QR    G+G
Sbjct:   37 YHEITVLSELLPKKLDGDRKISLVQFAHSTRMLFVKLLAVVKWVKSSKKFESCAAICYLLDQQSQYF-IETADRLVTISREELVVARLPAFQVTAAVDVLTQGTYLHLPTIIQERF-TLKPKISAVDEAN---VLLRLNQVLQYRISKVASTLSPRIKGIVIKNGMLILTVPGEFEVHLTVLGEREQTPWTLLNIKMLVEDYEIGYGAQLVHPL----QLNMLHNVLQSRMDV-----AK---NAISEVYNFLHAFAQSLQLDVLFCQASQLAA--GRLRNKIIIEKYNPKERMLSIGYWVQRITKKGMG 327          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig956.21168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK4_ECTSI0.000e+088.98Mediator of RNA polymerase II transcription subuni... [more]
A0A836CA29_9STRA5.600e-6230.26Mediator of RNA polymerase II transcription subuni... [more]
A0A3M6VE54_9STRA1.200e-3130.89Mediator of RNA polymerase II transcription subuni... [more]
A0A1V9ZMZ3_9STRA3.890e-3028.82Mediator of RNA polymerase II transcription subuni... [more]
M4BI28_HYAAE2.850e-2929.05Mediator of RNA polymerase II transcription subuni... [more]
A0A067CQG6_SAPPC3.370e-2929.15Mediator of RNA polymerase II transcription subuni... [more]
F0W2P3_9STRA1.150e-2728.44Mediator of RNA polymerase II transcription subuni... [more]
D8RD42_SELML2.590e-1828.42Mediator of RNA polymerase II transcription subuni... [more]
A0A368FEX2_ANCCA7.360e-1729.03Mediator of RNA polymerase II transcription subuni... [more]
A0A0B1T965_OESDE8.540e-1729.35Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
IPR013947Mediator complex, subunit Med14PFAMPF08638Med14coord: 24..215
e-value: 1.9E-36
score: 125.3
IPR013947Mediator complex, subunit Med14PANTHERPTHR12809MEDIATOR COMPLEX SUBUNITcoord: 24..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig956contigEcto-sp13_S_contig956:2580..9546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig956.21168.1mRNA_Ecto-sp13_S_contig956.21168.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig956 2188..9574 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig956.21168.1 ID=prot_Ecto-sp13_S_contig956.21168.1|Name=mRNA_Ecto-sp13_S_contig956.21168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1279bp
MAATPSGEDVEGRLLAPLSTLLASELCLRQTDHAFHDIRRLANILSRVNH
DSRREDLLDYIRSNRARFLKAYAIISWLSGNHGELVANASNALAEARSQR
EQIDACQDQFFFMHGGLFGARQRLYDVPVAVDVLIGGRYPHLPKGIEYCG
GDIDPRPIFELPANREEIVMRVDRAIRLALLRRGGVPSQFTSHTVKNGVL
TLTVNGEFELMVTLQAEREDARWTLLGITLLVQAREGESITAPVRDFRQQ
RYLHEVIQKAMDVHADGDAKPRPNALLAAYQVCHDMCCSMVLEILHAQAQ
KLATRVGGLWAAQLAVMFHKDSQVLDLCLWQREFSVGLGGTGRDVGVGGV
RVGEAPLRREQVATGSRLKAAEAEDSLPPPPVGCRYLRVHRPMDRNSQIV
ASLGPPGELLERRGLGSDMGDHSVTTDEETTAVDSLLTSSVQIYPGKLSC
ARMLLAAARLFASQKINTLAADVESYAAQLGTCVPRVTTVGGLSAYICPW
GGGGVEVSVDVKSGRYLVKDTLPGGGKAMASCVSRLREALNLLPLTDSQS
LGESIASTLSAGRSVLQKRSLPTQTNGEQDLRQQHVRRCMGESFGLLRRG
ELEHTFRCAFGVVPHLRWQALLGRTDTNVIDAGAEFPRLDGSDTLRSSVR
LGQFRENGVLLSEAWRKRTRNFRILPRRTSAIELTRAERAATIGQVPTAA
SVSAAFRLNSAPPLDGDLSCSSGWQQGGGTLPAALAASLAEVSDGGDDMA
SRSTRWRTDRGVGPGANGVKASSEGNVLEETGEMLSFFLEVDITGNLDVE
HTVVSATLPTAGQARNSLRPVVGETYQLFPCQPLSGSRCGSLDADLLPSE
LPPAVGNKRSASCLDADYPRGANGIAKGVHDGLCPTTLHAAVGTVGEASQ
TQLCTAVQMCNRFVPFARLQHALLRVGTGLSLDFRELTHFSGATQQVPHC
AVFLAGEHGWSSPEVAASSARVSFFPGHTQADTWEWDVTLGPTTSLMDFI
WAVPAKDEETGLAVTNGVVQEQLPLAHHIEIRGVRQEGIESSSTTRMAQG
KHIRFRFPPPFSVHAMCRSFALAGEGLTIMQTLATQASKMRQTGCEGAGY
GVVSCSPIHVAMRDSKLDHVVLLTHSAFSSRHISSADRPGLVLIPWPHSP
TCPAAMRELEASVRKHRDLSALLHGLSRTVPVMAEVSRVLPGVGSAAGMN
GDRSPARGEFVLKAVTPARFVLSKSPLGGRRSQSKPALTLAVEAGGQVRV
STPGGKDVVADTGALRRLLLEWIASTSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013947Mediator_Med14