prot_Ecto-sp13_S_contig9541.21150.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9541.21150.1
Unique Nameprot_Ecto-sp13_S_contig9541.21150.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length184
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9541.21150.1 vs. uniprot
Match: D7FXG9_ECTSI (Palmitoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG9_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 4.240e-108
Identity = 157/184 (85.33%), Postives = 162/184 (88.04%), Query Frame = 0 
Query:    1 MPASRLAASFLSLFRSRRSRPRQMHHTDLQRCTFRMRDHHCVWVGQCVAERNRRSFLGFLILLAGLSFWFSHRMVMALSSGETSACRDDGRACKQAVWPHALRHLLRSNSGGEDVGVAIYALTAGLLATALAAQEHFACTSRGSGVVKSGSSFAGLECLEVACPLASFHPPPIYLSVPVVFLEF 184
            MPASRLAASF   F S  + P    HTDLQRCTFRMRDHHCVWVGQCVAERNRRSFLGFLILLAG+SFWFS R VMALSSGET AC DDGRACKQAVWPH LRHLLR+N GGEDVGVAIY LTAGLLATALAAQEHF CTSRGSGVVKSGSSF+GLEC EVACP ASFHPPPIYLSVPVV+L F
Sbjct:    1 MPASRLAASFFVSF-SVTALPSPATHTDLQRCTFRMRDHHCVWVGQCVAERNRRSFLGFLILLAGMSFWFSRREVMALSSGETGACPDDGRACKQAVWPHVLRHLLRTNRGGEDVGVAIYVLTAGLLATALAAQEHFTCTSRGSGVVKSGSSFSGLECFEVACPFASFHPPPIYLSVPVVYLVF 183
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BLAST of mRNA_Ecto-sp13_S_contig9541.21150.1 vs. uniprot
Match: A0A6H5L5P4_9PHAE (Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5P4_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 6.320e-60
Identity = 92/102 (90.20%), Postives = 97/102 (95.10%), Query Frame = 0 
Query:   36 MRDHHCVWVGQCVAERNRRSFLGFLILLAGLSFWFSHRMVMALSSGETSACRDDGRACKQAVWPHALRHLLRSNSGGEDVGVAIYALTAGLLATALAAQEHF 137
            MRDHHCVWVGQC+AERNRRSFLGFLILLAGLSFWFS R+VMALSSGETSACRDDGRACKQAVWPH LRHLLR+N GGED+GVAIYALT GLLATALAAQ+ F
Sbjct:    1 MRDHHCVWVGQCIAERNRRSFLGFLILLAGLSFWFSRRVVMALSSGETSACRDDGRACKQAVWPHVLRHLLRTNRGGEDLGVAIYALTTGLLATALAAQQIF 102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9541.21150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXG9_ECTSI4.240e-10885.33Palmitoyltransferase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5L5P4_9PHAE6.320e-6090.20Palmitoyltransferase n=1 Tax=Ectocarpus sp. CCAP 1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 19..83
e-value: 8.0E-14
score: 51.9
NoneNo IPR availablePANTHERPTHR22883:SF147PALMITOYLTRANSFERASEcoord: 18..117
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 18..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..54
NoneNo IPR availablePROSITEPS50216DHHCcoord: 20..61
score: 14.145
NoneNo IPR availableTMHMMTMhelixcoord: 55..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9541contigEcto-sp13_S_contig9541:3443..4856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9541.21150.1mRNA_Ecto-sp13_S_contig9541.21150.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9541 3443..4856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9541.21150.1 ID=prot_Ecto-sp13_S_contig9541.21150.1|Name=mRNA_Ecto-sp13_S_contig9541.21150.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=184bp
MPASRLAASFLSLFRSRRSRPRQMHHTDLQRCTFRMRDHHCVWVGQCVAE
RNRRSFLGFLILLAGLSFWFSHRMVMALSSGETSACRDDGRACKQAVWPH
ALRHLLRSNSGGEDVGVAIYALTAGLLATALAAQEHFACTSRGSGVVKSG
SSFAGLECLEVACPLASFHPPPIYLSVPVVFLEF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC