prot_Ecto-sp13_S_contig9534.21142.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9534.21142.1
Unique Nameprot_Ecto-sp13_S_contig9534.21142.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length54
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9534.21142.1 vs. uniprot
Match: A0A6H5JU35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU35_9PHAE)

HSP 1 Score: 104 bits (259), Expect = 1.450e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR 54
            MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR
Sbjct:   40 MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR 93
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BLAST of mRNA_Ecto-sp13_S_contig9534.21142.1 vs. uniprot
Match: D7FPE7_ECTSI (Intraflagellar transport protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE7_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 6.400e-27
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR 54
            MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR
Sbjct:   95 MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR 148
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BLAST of mRNA_Ecto-sp13_S_contig9534.21142.1 vs. uniprot
Match: A0A836CBQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.940e-11
Identity = 33/54 (61.11%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:    1 MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVETKGR 54
            MR Q+  + A  EA K+E A SE G+ LE LE+K+R YETNIF L+EFVETKGR
Sbjct:   42 MRAQLSAMAASCEAAKREAAMSEVGRELENLEQKLRAYETNIFSLREFVETKGR 95
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9534.21142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JU35_9PHAE1.450e-27100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPE7_ECTSI6.400e-27100.00Intraflagellar transport protein 74 n=1 Tax=Ectoca... [more]
A0A836CBQ5_9STRA4.940e-1161.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 21..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9534contigEcto-sp13_S_contig9534:3544..3969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9534.21142.1mRNA_Ecto-sp13_S_contig9534.21142.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9534 3544..3969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9534.21142.1 ID=prot_Ecto-sp13_S_contig9534.21142.1|Name=mRNA_Ecto-sp13_S_contig9534.21142.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=54bp
MRGQVQQLTARHEACKKELAASETGKTLEALERKMRTYETNIFFLKEFVE
TKGR
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