prot_Ecto-sp13_S_contig953.21138.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig953.21138.1
Unique Nameprot_Ecto-sp13_S_contig953.21138.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length276
Homology
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 410 bits (1054), Expect = 1.070e-128
Identity = 235/276 (85.14%), Postives = 245/276 (88.77%), Query Frame = 0
Query:    1 GRSQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAWCLHRLVRKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGEKNGDMPEPMPGQEDGHHWKRAWELASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAIDLGHLQALAKERTQKKRTSDPATTMT 276
            GRSQA++LKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLS ILWIVSVPWVAWCLHRLV KAEEET    X  XXXXXXXXXX     XXXXXXXXXXXXXKEKPHLGYFRRFLSGI S+CSLL+AM AAS LCLLYIFATMILWAVGI            +KNGDMPEPMPGQEDGHHWKRAWELASLRNQG RANRGQAHFH+APLLKSKTGLDMQHLAQLTKNR +ESNSEAKLIEVD+KLPYFAIDLGHLQ LAKE+T+KKRTSDPATTMT
Sbjct: 1367 GRSQARMLKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSTILWIVSVPWVAWCLHRLVHKAEEETXXXXXXXXXXXXXXXXXERDDGXXXXXXXXXXXXXKEKPHLGYFRRFLSGIKSMCSLLVAMVAASFLCLLYIFATMILWAVGIXXXXXXXXXXXDKKNGDMPEPMPGQEDGHHWKRAWELASLRNQGARANRGQAHFHIAPLLKSKTGLDMQHLAQLTKNRHDESNSEAKLIEVDQKLPYFAIDLGHLQKLAKEKTEKKRTSDPATTMT 1642          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: A0A6H5K4M1_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M1_9PHAE)

HSP 1 Score: 260 bits (665), Expect = 3.050e-77
Identity = 158/265 (59.62%), Postives = 169/265 (63.77%), Query Frame = 0
Query:    1 GRSQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAWCLHRLVRKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGEKNGDMPEPMPGQEDGHHWKRAWELASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAIDLGHLQALAKERTQK 265
            GRSQAK+LKPFST+HQ KTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWV  CLH LV KA E                                              +   SGI S+ SLLIAM AAS LC+LY+FATMILWAVGIWMIVTW                           A + A  R    RANR QAHF VAPLLKSKTGLDM+HLAQLTKNRD+ESNSEAKLIEVD+KLPYFAIDLGHLQALAKERT+K
Sbjct:  688 GRSQAKMLKPFSTSHQRKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVDSCLHCLVHKAGEAAS----------------------------------------WLLQTIFSGIRSMFSLLIAMVAASFLCVLYVFATMILWAVGIWMIVTWGLG------------------------ACQPAESR---ARANRAQAHFRVAPLLKSKTGLDMKHLAQLTKNRDDESNSEAKLIEVDQKLPYFAIDLGHLQALAKERTEK 885          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 2.810e-63
Identity = 121/251 (48.21%), Postives = 156/251 (62.15%), Query Frame = 0
Query:   11 FSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAWCLHRLV-----RKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGEKNGDMPEPMPGQEDGHHWKRAWELASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAIDLGHLQ 256
            ++ TH+W+T EGG+QR+ FAFTFG AA+ +SAILW +SVPWVAWCL RL      ++AE   + E   N                            KEK H GYFRR     +    L++A A A+ LC LYI  +++LW VG+ MI  WV +NW  ++ D P  MPGQE+G HW+RAW+L SLRN GVR +  QAHF+V P LKSKTGLD QHLA LTK RD+++ SE  LI+ DR+LP   ID+ HL+
Sbjct: 1493 WTQTHEWRTFEGGVQRVLFAFTFGAAAIVMSAILWTLSVPWVAWCLLRLAHPVVEKRAENLEDEEDDTNQGLGDIEEEEEM----------------KEKVHPGYFRRIFITFLWSAVLVVATAVAAILCALYILFSVVLWFVGLHMIYKWVRTNWTPESNDRPRAMPGQEEGDHWQRAWDLVSLRNHGVREDFDQAHFNVLPFLKSKTGLDRQHLAWLTKARDDKAKSEEDLIDGDRELPGARIDMEHLR 1727          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: D8LH98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH98_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 2.930e-53
Identity = 107/257 (41.63%), Postives = 146/257 (56.81%), Query Frame = 0
Query:    3 SQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAWCLHRLVRKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGEKNGDM-PEPMPGQEDGHHWKRAWELASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAIDLGHLQAL 258
            S ++  +PFS   QW  +EG LQRL FAFT G A++ +  +LWI SVPWVAWC  R +   E+  E                                  +     GY R  L  + +L  ++++MA A+  CLLYI  + ILW +G + ++ W ++N   K  D  PE MPGQEDG HW+ AW+LA+LRN G+R +R   HF+V P LKSKTGLDMQHLA++    D +SNSE +L+EVDR+L    ID+ HL +L
Sbjct:  238 SGSRNSEPFSKRPQWIAVEGFLQRLAFAFTMGGASLVVFTMLWIFSVPWVAWCFLRSLLPPEDGEEG------FHLDTIKMIKTCSCWKGGKGVNIRSEEENNSSPGYVRELLWVVCALVVMMVSMAFAAVFCLLYIVGSGILWILGTFRLLVWGWNNCSRKRDDKNPEAMPGQEDGSHWENAWKLANLRNHGIREDREHPHFYVVPFLKSKTGLDMQHLARMANIGDEKSNSEKELVEVDRELADARIDIRHLSSL 488          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 2.130e-33
Identity = 72/151 (47.68%), Postives = 100/151 (66.23%), Query Frame = 0
Query:  109 GYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGEKNGDM-PEPMPGQEDGHHWKRAWELASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAIDLGHLQAL 258
            GY R  L  + +L  ++++MA A+ LCLLYI  + ILW +G + ++ W ++N   K  +  PE +PGQE G HW+ AW+LA+LRN G+R +R   HF V   LKSKTGLD QHLAQ+    D +SNSE +L+EVDR+L    ID+ HL +L
Sbjct:  795 GYVRELLWVVFALVIMMVSMAFATVLCLLYIVGSGILWIMGTFRLLVWGWNNCSRKRDNKNPEAVPGQEGGSHWENAWKLANLRNHGIREDREHPHFKVVQFLKSKTGLDTQHLAQMANITDEKSNSEKELVEVDRELADAHIDIRHLSSL 945          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 9.400e-28
Identity = 76/243 (31.28%), Postives = 114/243 (46.91%), Query Frame = 0
Query:    2 RSQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAWCL-----HRLVRKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNW----------GEKNGDMPEPMPGQEDGHHWKRAWE-LASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNR 228
            R + +   P + T+ W T +G LQRL F  T G+ AV L+++LW++S+PWVAW L     +    + +++ + E  A                                   G  R  L  + ++ +  +A+  A+ LC   I  +  LW  G+W +  WV   W          GE + + P  MPGQE G +W+ AW+ +A  RN  +R   G  HFHVAPLL+S TGLDM+ L  L K +
Sbjct:  183 RQEGEGFVPITATYGWHTFDGTLQRLFFVLTMGLVAVALNSLLWVLSLPWVAWRLVCWVSYEFANEGDDDEDEETNAPVKR-------------------------------GKLRESLLALGTIAACWLALLFAAALCGACIVGSFFLWFRGVWNVWEWV--RWRRSEEGKFVSGETDQECPTAMPGQEHGQNWRHAWQHVAKARNLRIRHEHGSEHFHVAPLLQSTTGLDMKRLCSLAKKK 392          
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 4.130e-27
Identity = 78/249 (31.33%), Postives = 118/249 (47.39%), Query Frame = 0
Query:    2 RSQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVPWVAW-----CLHRLVRKAEEETEAEAXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGIWMIVTWVYSNWGE---------KNGDMPEPMPGQEDGHHWKRAWE-LASLRNQGVRANRGQAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSE 235
            R   +   P + T+ W T +G LQRL FA T G+ AV L+A+LW++S+PWVAW      L+++V   + + E E   +                            + +   G FR FL   + + + + A+  A  LC + +  + +LW  G+  +  W +    E         K G  P  MPGQE G +W+ AW+ +A  RN  +R      HFHVAPLL++ TGLDM+    L K + N+ N E
Sbjct: 1356 RQHKESFAPITYTYGWHTFDGMLQRLLFASTMGLVAVTLNALLWVLSLPWVAWRIVCWVLYKVVETGDPD-EVETFLSV---------------------------RLRDKKGKFRAFLWVFLGIIACVFALGFAVALCGVCVAGSFVLWLRGVCNVFEWAHWRLSEEGRFVSGETKKGTCPTAMPGQERGSNWRHAWKYVAKARNFRIRHEHDSEHFHVAPLLQATTGLDMEQFCLLAKEKFNDKNQE 1576          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig953.21138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LH99_ECTSI1.070e-12885.14Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5K4M1_9PHAE3.050e-7759.62Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D8LHA0_ECTSI2.810e-6348.21Transient Receptor Potential Channel. Partial sequ... [more]
D8LH98_ECTSI2.930e-5341.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT3_9PHAE2.130e-3347.68Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
D7FNX2_ECTSI9.400e-2831.28Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB40_9PHAE4.130e-2731.33Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..276
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..158
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig953contigEcto-sp13_S_contig953:16925..18081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig953.21138.1mRNA_Ecto-sp13_S_contig953.21138.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig953 16923..18081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig953.21138.1 ID=prot_Ecto-sp13_S_contig953.21138.1|Name=mRNA_Ecto-sp13_S_contig953.21138.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=276bp
GRSQAKILKPFSTTHQWKTLEGGLQRLEFAFTFGVAAVGLSAILWIVSVP
WVAWCLHRLVRKAEEETEAEAEANEPNDGGSSTNERDDGDDDDDDDGDDV
DDKEKPHLGYFRRFLSGIISLCSLLIAMAAASCLCLLYIFATMILWAVGI
WMIVTWVYSNWGEKNGDMPEPMPGQEDGHHWKRAWELASLRNQGVRANRG
QAHFHVAPLLKSKTGLDMQHLAQLTKNRDNESNSEAKLIEVDRKLPYFAI
DLGHLQALAKERTQKKRTSDPATTMT
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