prot_Ecto-sp13_S_contig9518.21127.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9518.21127.1
Unique Nameprot_Ecto-sp13_S_contig9518.21127.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length543
Homology
BLAST of mRNA_Ecto-sp13_S_contig9518.21127.1 vs. uniprot
Match: D7G440_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G440_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 3.980e-160
Identity = 368/502 (73.31%), Postives = 381/502 (75.90%), Query Frame = 0
Query:    1 RGYGGGYGGGCPGRDGGHDEPSLHQEGGSGGASSRSDGDAGRASCWQEGRPVKPPENGRKGYLEERQRHPRLLMDSLASAANNSRHNVGTEGG----------SSGHGSGXXHGVVGMXXXXGSNGHSLRRH-------SDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHGSESAPPPIPENGDLVGALDGFGGSGSSSPAGLLGEIGKQFSLALNGSFGHEGSDTREASMPPXXXXVSKPREAGTTAEKGLQDTSSHSEKSGVGRMAEGLLKQLDRAMSSTSVGDGSGHXXXXXXXXXXXXXXXXXXXXXXVASVGALGSVVGGGSRRPSGLVLPRSQQDMDQGRDGXXXXXXEDEATNLDADTSGDNRFGRAFTG----GGTPHSNDGGRDESIGPAERAFAAAFGXXXXXXX--AVCSTPRVTSHAKLSFGTPVTERVVSTSTSASVYGALSRVTPSASVFGTPLRPFAADNAEPSAGSTTGGSGHGSERP 479
            RGYGGG+GGGC GRDGGHDEPSLHQEGGSG A  RSDGDAG ASCWQ GRP KPP+N  +GYLEERQRHPRLL    A A   S+      G                  XX      XXXX   G   R+             XXXXXXXXXXXXXXX                 RHGSESAPPPIPENG+LVGALDG GGSGSSSPAGLLGEIGKQFSLALN SF  EGSDT EAS PP    VSKPR+  TTAEKGL+DTSSHSEK+GVGRMAEGLLKQ+DRA+ S SVGDGSG XXXXXXXXXXXXXXXXXXXXXXVASVGALGS VGGGSRRPSGLVLP SQQDMDQGRDG XXXXX DEATNLDAD SGDNRFGRAFTG    GGTPH NDGG DES+GPAERAFAAAFGXXXXXXX  AVCSTPRVTSH KLSFGTPVTERVVSTSTSAS+YG  SRVTPSASVFGT LR FAAD A PSAGST GGSGHGS  P
Sbjct:    3 RGYGGGHGGGCCGRDGGHDEPSLHQEGGSGDAE-RSDGDAGTASCWQ-GRPFKPPKNCCEGYLEERQRHPRLLC---ALARVRSQQQPPQRGDVRRQQRVRQLXXXXXXXXXXXXXXXXXXXXGKGERPRKQWAQPQLGQQRRGXXXXXXXXXXXXXXXSALSSSSTGSQHGSGSSRHGSESAPPPIPENGELVGALDGSGGSGSSSPAGLLGEIGKQFSLALNRSFNLEGSDTGEASKPPPP--VSKPRDPRTTAEKGLEDTSSHSEKTGVGRMAEGLLKQVDRAVPSISVGDGSGXXXXXXXXXXXXXXXXXXXXXXXVASVGALGSGVGGGSRRPSGLVLPWSQQDMDQGRDGGXXXXX-DEATNLDADASGDNRFGRAFTGAGAGGGTPHLNDGGHDESMGPAERAFAAAFGXXXXXXXXXAVCSTPRVTSHPKLSFGTPVTERVVSTSTSASIYGTPSRVTPSASVFGTTLRGFAADTAGPSAGSTAGGSGHGSAGP 496          
BLAST of mRNA_Ecto-sp13_S_contig9518.21127.1 vs. uniprot
Match: D7FSU7_ECTSI (FYVE-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSU7_ECTSI)

HSP 1 Score: 301 bits (770), Expect = 8.120e-88
Identity = 203/322 (63.04%), Postives = 208/322 (64.60%), Query Frame = 0
Query:  163 SESAPPPIPENGDLVGALDGFGGSGSSSPAGLLGEIGKQFSLALNGSFGHEGSDTREASMPPXXXX-VSKPREAGTTAEKGLQDTSSHSEKSGVGRMAEGLLKQLDRAMSSTSVGDGSGHXXXXXXXXXXXXXXXXXXXXXXVASVGALGSVVGGGSRRPSGLVLPRSQQDMDQGRDGXXXXXXEDEATNLDADTSGDNRFGRAFTG----GGTPHSNDGGRDESIGPAERAFAAAFGXXXXXXXAVCSTPRVTSHAKLSFGTPVTERVVSTSTSASVYGALSRVTPSASVFGTPLRPFAADNAEPSAGSTTGGSGHGSERP 479
            SESAPPPIPENG+LVG LD  GGSGSSSPAGLLGEIGKQFSLALNGSFGHEGSDT EASMPPXXXX V+KPR+AG TAEKGLQDTSSHSEK+G                                                                             DMDQGRDG XXXX EDEATNLDAD SGDNRFGRAFTG    GGTPH NDGGRDES+GPAERAFAAAFG       AVCSTPRVTSH KLSFGTPVTERVVSTSTSASVYG  SRVTPS       LR FAAD A PSAGST GGSGHGS  P
Sbjct:  700 SESAPPPIPENGELVGTLDSSGGSGSSSPAGLLGEIGKQFSLALNGSFGHEGSDTGEASMPPXXXXXVAKPRDAGATAEKGLQDTSSHSEKTG-----------------------------------------------------------------------------DMDQGRDGGXXXX-EDEATNLDADASGDNRFGRAFTGAGAGGGTPHLNDGGRDESMGPAERAFAAAFGGGG----AVCSTPRVTSHPKLSFGTPVTERVVSTSTSASVYGTPSRVTPSXXXXXXXLRGFAADTAGPSAGSTAGGSGHGSAGP 939          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9518.21127.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G440_ECTSI3.980e-16073.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FSU7_ECTSI8.120e-8863.04FYVE-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9518contigEcto-sp13_S_contig9518:12..2851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9518.21127.1mRNA_Ecto-sp13_S_contig9518.21127.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9518 12..2852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9518.21127.1 ID=prot_Ecto-sp13_S_contig9518.21127.1|Name=mRNA_Ecto-sp13_S_contig9518.21127.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=543bp
RGYGGGYGGGCPGRDGGHDEPSLHQEGGSGGASSRSDGDAGRASCWQEGR
PVKPPENGRKGYLEERQRHPRLLMDSLASAANNSRHNVGTEGGSSGHGSG
SGHGVVGMGSGHGSNGHSLRRHSDGAGGGGSGSGHGTAGRRLSALSSSST
GSRHGPGSSRHGSESAPPPIPENGDLVGALDGFGGSGSSSPAGLLGEIGK
QFSLALNGSFGHEGSDTREASMPPPPPPVSKPREAGTTAEKGLQDTSSHS
EKSGVGRMAEGLLKQLDRAMSSTSVGDGSGHGSGWGGSVHGAGGSAQGSA
HGSVASVGALGSVVGGGSRRPSGLVLPRSQQDMDQGRDGGGGGGGEDEAT
NLDADTSGDNRFGRAFTGGGTPHSNDGGRDESIGPAERAFAAAFGGGGGG
GGAVCSTPRVTSHAKLSFGTPVTERVVSTSTSASVYGALSRVTPSASVFG
TPLRPFAADNAEPSAGSTTGGSGHGSERPRPQELVRDRGCGGGGQGGGVR
GGDGELACGEGGGEPRVGGVELGEEVGVPPCHRGMFSRDRAHV
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