prot_Ecto-sp13_S_contig9515.21126.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9515.21126.1
Unique Nameprot_Ecto-sp13_S_contig9515.21126.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length213
Homology
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: D8LIY3_ECTSI (Peroxisomal membrane protein PEX14 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY3_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 5.790e-130
Identity = 200/212 (94.34%), Postives = 206/212 (97.17%), Query Frame = 0
Query:    1 MRQDMVKRAVAFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVSAPTKRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQTGAIVGGGVGGAKPPRGGESIDIRVRVSVTAHL 212
            +RQDMVKRAV+FLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALV+APTKRF+KGSVRSEAV SGG+VFISGQTALP PTAGDDSGEGDVGV ESLSPEQQAARALDK+KELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTV QTGAIVGGGVGGAKP RGGESIDIRV VSVTAHL
Sbjct:    4 IRQDMVKRAVSFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVAAPTKRFQKGSVRSEAVASGGIVFISGQTALPSPTAGDDSGEGDVGVAESLSPEQQAARALDKIKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVIQTGAIVGGGVGGAKPRRGGESIDIRVSVSVTAHL 215          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: A0A835Z4L3_9STRA (Peroxisomal membrane protein PEX14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 4.060e-18
Identity = 65/184 (35.33%), Postives = 99/184 (53.80%), Query Frame = 0
Query:    2 RQDMVKRAVAFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAELAAAEASAKTRAALVSAPT-KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQTGAIV 184
            R++MV RAV FL HPKV  AP +K+I+FL++K+LT EEI EAL++A    +  A+A T  A     T +RF    V+   V++GG++ +S   A  L    D +G              QA + L+++  +L+  G+S S+++SA V VR+   D   V   W  W+  +N PA    + G  V
Sbjct:    4 REEMVARAVKFLLHPKVVDAPLSKKISFLEEKELTREEIDEALKRAESPESIGAAASTSKAKAQRETIQRFEHAGVQG--VITGGVLHLSAVAAKDL--GADAAG--------------QARQVLEQIDAVLQAKGASRSRIISATVFVRNAQTDGGAVAAEWELWLGGENHPAFACVEAGTAV 169          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: A0A432V142_9HYPH (RidA family protein n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V142_9HYPH)

HSP 1 Score: 71.6 bits (174), Expect = 1.200e-12
Identity = 45/107 (42.06%), Postives = 57/107 (53.27%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPAR 175
            KR    S RS AVV G MV++ GQ          DS + D+ V        Q    L K+ +LLEE GSS SKVVSA + ++ +  D  G+ + W  WID DNPPAR
Sbjct:    5 KRIDANSRRSRAVVVGNMVYLGGQVG--------DSKQADIKV--------QTRETLAKIDQLLEEAGSSRSKVVSATIWLKSM-DDYDGMNEIWDAWIDADNPPAR 94          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: UPI0018E2F7A5 (RidA family protein n=1 Tax=Caulobacter hibisci TaxID=2035993 RepID=UPI0018E2F7A5)

HSP 1 Score: 62.8 bits (151), Expect = 2.610e-9
Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQ 179
            +R  K +  S+AVV+GG+VF+SG  A           E  VG     S  +Q    L ++ + L + G+  SK+VSA + + D+GQ +  +  AW  W+D +NPPART  +
Sbjct:    3 ERIGKAARWSDAVVAGGLVFLSGHVA-----------EETVGG----SVLEQTKEVLAQIDDTLAQAGTDKSKLVSATIHLADIGQ-IAAMNAAWDAWVDPENPPARTTVE 97          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: L1JS80_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JS80_GUITC)

HSP 1 Score: 62.8 bits (151), Expect = 3.920e-9
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVS-GGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQ 179
            +R R G  R   +V  GG+V+++GQT+        D GE D+          Q  R L+K+  LL E GS  S++++A++ ++D+ +D  G+   W  W+D +N P R   +
Sbjct:   13 RRLRTGDPRCSGIVCYGGIVYLTGQTS--------DEGE-DI--------RSQTRRVLEKIDALLAEAGSDKSRLLTAMIWLKDIQRDFHGMNAVWNDWVDAENKPTRACVE 107          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: A0A8D3XYA4_9PSED (Endoribonuclease n=4 Tax=Pseudomonas balearica TaxID=74829 RepID=A0A8D3XYA4_9PSED)

HSP 1 Score: 61.6 bits (148), Expect = 8.690e-9
Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0
Query:   67 PTKRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQ 179
            P +R    +  SEAV+  G V++SGQ A  L         GD+         QQ    L  +  LL EVG+  ++++SAL+ +RD+  D  G+ + W  W+   + PART  +
Sbjct:    2 PIRRLHTETRYSEAVIHSGTVYLSGQLADDL--------SGDI--------RQQTRETLASIDRLLAEVGTDKTRLLSALIHLRDIDGDYAGMNEVWDAWVPAGSAPARTTVR 98          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: A0A1C7HEJ8_9BURK (RidA/YER057c/UK114 family protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A1C7HEJ8_9BURK)

HSP 1 Score: 60.5 bits (145), Expect = 1.960e-8
Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQ 179
            KR R  +  SEAVV GG+V+ISGQ  L                  + +  QQ    L  + ELL E G+  S+++ A V + ++G DL  + K W  W+  ++ PARTV Q
Sbjct:    5 KRIRVNNRFSEAVVHGGIVYISGQVDLSA----------------ARTARQQTKNVLAIIDELLAEAGTDKSRLLRAFVYLANIG-DLQDMNKEWEAWVVPESTPARTVAQ 98          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: UPI0007BC4B00 (RidA family protein n=1 Tax=Microbacterium hydrocarbonoxydans TaxID=273678 RepID=UPI0007BC4B00)

HSP 1 Score: 60.1 bits (144), Expect = 2.550e-8
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQ 179
            +R   G+  S AVV  G V+++GQ A                  E    E+Q+  AL  V +LL +VGS  SK++S  V + D+  D  G+   W  WID  NPPAR   +
Sbjct:    4 ERINPGARMSAAVVHDGTVYLAGQVA------------------EGAGVEEQSRAALALVDDLLAQVGSDRSKLLSVTVYLADMA-DFAGMNSVWETWIDTANPPARATVE 95          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: UPI0019EB9FB2 (RidA family protein n=1 Tax=Acetobacteraceae bacterium H6797 TaxID=2571211 RepID=UPI0019EB9FB2)

HSP 1 Score: 60.1 bits (144), Expect = 2.790e-8
Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0
Query:   69 KRFRKGSVRSEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQTGAIV 184
            KR  +    S AVV+GGM++++GQ A       DDS         SL  E Q A  L ++  LL E G++ + +VS    + D+ +D P + +AW +W+D  N PAR +T  G +V
Sbjct:    4 KRLAEEQRLSGAVVAGGMIWLAGQVA-------DDS---------SLDTEGQTADILAQIDALLAEAGTTKAALVSVTCILTDI-KDAPAMNRAWDKWLDTANKPAR-MTIEGKLV 101          
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Match: UPI000688B586 (RidA family protein n=1 Tax=unclassified Mesorhizobium TaxID=325217 RepID=UPI000688B586)

HSP 1 Score: 57.4 bits (137), Expect = 2.050e-7
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
Query:   78 SEAVVSGGMVFISGQTALPLPTAGDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVRDLGQDLPGVEKAWGRWIDKDNPPARTVTQT 180
            S+AVV GG+V++SGQ              G++G     + ++Q  +ALD+V  LL+ VGS  SK++S  + + D+G D   +   W  W+     PAR   QT
Sbjct:    2 SQAVVCGGVVYLSGQV-------------GEIG----FAVDEQTRQALDRVDRLLKSVGSDKSKILSTQIWLADIG-DFETMNAIWKNWLPAGAAPARATCQT 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9515.21126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIY3_ECTSI5.790e-13094.34Peroxisomal membrane protein PEX14 n=1 Tax=Ectocar... [more]
A0A835Z4L3_9STRA4.060e-1835.33Peroxisomal membrane protein PEX14 n=1 Tax=Tribone... [more]
A0A432V142_9HYPH1.200e-1242.06RidA family protein n=1 Tax=Pseudaminobacter arsen... [more]
UPI0018E2F7A52.610e-935.14RidA family protein n=1 Tax=Caulobacter hibisci Ta... [more]
L1JS80_GUITC3.920e-931.25Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A8D3XYA4_9PSED8.690e-931.86Endoribonuclease n=4 Tax=Pseudomonas balearica Tax... [more]
A0A1C7HEJ8_9BURK1.960e-835.14RidA/YER057c/UK114 family protein n=2 Tax=Burkhold... [more]
UPI0007BC4B002.550e-834.23RidA family protein n=1 Tax=Microbacterium hydroca... [more]
UPI0019EB9FB22.790e-835.34RidA family protein n=1 Tax=Acetobacteraceae bacte... [more]
UPI000688B5862.050e-733.98RidA family protein n=1 Tax=unclassified Mesorhizo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 68..188
e-value: 3.1E-21
score: 77.4
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 66..183
IPR006785Peroxisome membrane anchor protein Pex14p, N-terminalPFAMPF04695Pex14_Ncoord: 2..59
e-value: 3.2E-15
score: 57.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..58
e-value: 9.3E-17
score: 62.1
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 78..181
e-value: 6.6E-13
score: 48.7
NoneNo IPR availablePANTHERPTHR23058:SF0PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 1..62
IPR025655Peroxisomal membrane protein 14PANTHERPTHR23058PEROXISOMAL MEMBRANE PROTEIN PEX14coord: 1..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9515contigEcto-sp13_S_contig9515:1844..3477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9515.21126.1mRNA_Ecto-sp13_S_contig9515.21126.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9515 1587..3546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9515.21126.1 ID=prot_Ecto-sp13_S_contig9515.21126.1|Name=mRNA_Ecto-sp13_S_contig9515.21126.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=213bp
MRQDMVKRAVAFLRHPKVKGAPEAKQIAFLKDKQLTAEEIGEALRKAAEL
AAAEASAKTRAALVSAPTKRFRKGSVRSEAVVSGGMVFISGQTALPLPTA
GDDSGEGDVGVTESLSPEQQAARALDKVKELLEEVGSSTSKVVSALVCVR
DLGQDLPGVEKAWGRWIDKDNPPARTVTQTGAIVGGGVGGAKPPRGGESI
DIRVRVSVTAHL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf
IPR006785Pex14_N
IPR036388WH-like_DNA-bd_sf
IPR006175YjgF/YER057c/UK114
IPR025655PEX14