prot_Ecto-sp13_S_contig9512.21122.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9512.21122.1
Unique Nameprot_Ecto-sp13_S_contig9512.21122.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length317
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9512.21122.1 vs. uniprot
Match: D7FHD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHD6_ECTSI)

HSP 1 Score: 578 bits (1490), Expect = 1.900e-190
Identity = 284/316 (89.87%), Postives = 300/316 (94.94%), Query Frame = 0 
Query:    1 MLNVGRFQERAARSHDAPASGLRRTPRHVSTPNRDWLTSVEAAVIHLLCGVPRLRDELLNFEHQDVHKSWWATIKSWFIAPRQRLERNFVLQLAAIARGLWYNEISPDKIDLQQDPEPFDKDPSGIYVRIVELTNTIRRLLGLSRIFRTPVPLVRDQHHMVLQVFLQALQNVLPLETMTFVDFREVRAYYKDNLVLVELHEAPDLLFVVLDEQGRRDRKKRTERLQVMLFDTDVIVNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNVTSKFVQLGAATGTTKDGIPVVPWLKAADKPTAMVFRKKATRKAI 316
            ++ V   QERAARSH APASGLRRTPRHVSTP+RDWLTSVE+AVIHLLCGVPRLRDELL+FEHQDV+KSWWATIKSWFIAPRQRLERNFVLQLAAIARGLWY+EISP K DLQQDPEPFDKDPSGIYVRIV+LTN++RRLLGLSRIFRTPVPLVRDQHHMVLQVFLQAL+NVLPLETM FVDF EVRAYY+DNLVLVEL EAPDLLFV+LDEQ +RDRKKRTERLQVMLFDTD IVNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNV SK VQLGAATGTTKDGIPVVPWL+AADKPTAMVFRKK  +KAI
Sbjct: 1426 VVYVADRQERAARSHGAPASGLRRTPRHVSTPDRDWLTSVESAVIHLLCGVPRLRDELLDFEHQDVYKSWWATIKSWFIAPRQRLERNFVLQLAAIARGLWYDEISPAKTDLQQDPEPFDKDPSGIYVRIVQLTNSVRRLLGLSRIFRTPVPLVRDQHHMVLQVFLQALENVLPLETMAFVDFWEVRAYYEDNLVLVELDEAPDLLFVLLDEQAKRDRKKRTERLQVMLFDTDDIVNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNVASKLVQLGAATGTTKDGIPVVPWLEAADKPTAMVFRKKTPKKAI 1741
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BLAST of mRNA_Ecto-sp13_S_contig9512.21122.1 vs. uniprot
Match: A0A6H5LGQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGQ6_9PHAE)

HSP 1 Score: 501 bits (1290), Expect = 3.530e-161
Identity = 248/288 (86.11%), Postives = 261/288 (90.62%), Query Frame = 0 
Query:   28 HVSTPNRDWLTSVEAAVIHLLCGVPRLRDELLNFEHQDVHKSWWATIKSWFIAPRQRLERNFVLQLAAIARGLWYNEISPDKIDLQQDPEPFDKDPSGIYVRIVELTNTIRRLLGLSRIFRTPVPLVRDQHHMVLQVFLQALQNVLPLETMTFVDFREVRAYYKDNLVLVELHEAPDLLFVVLDEQGRRDRKKRTERLQVMLFDTDVIVNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNVTSKFVQLGAATGTTKDGIPVVPWLKAADKPTAMVFRKKATRKA 315
            HVSTP+ DWLTSVEAAVIHLLCGVPRLRDELL+FEHQDV+KSWWATIKSWFI+PRQRLERNFVLQLAAIARGLWY+EI+PDKIDLQQDPEPFDKDPSGIYVRI+EL N                PLVRDQH MVLQVFLQALQNVLPLETMTFVDFR+VRAYY+DNL LVEL EAPDLLFVVLDEQ R DRKKRTERLQVMLFDTD +VNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNV SK VQLG ATGTT+DGIPVVPWL+AADKPTAMVFRKKAT+KA
Sbjct: 1517 HVSTPDCDWLTSVEAAVIHLLCGVPRLRDELLDFEHQDVYKSWWATIKSWFISPRQRLERNFVLQLAAIARGLWYDEINPDKIDLQQDPEPFDKDPSGIYVRIIELGNI--------------APLVRDQHDMVLQVFLQALQNVLPLETMTFVDFRKVRAYYEDNLALVELDEAPDLLFVVLDEQARHDRKKRTERLQVMLFDTDDVVNYTPAAVLNGSIDGDTVVSRVDLDDDLWYRCTGGNVASKLVQLGVATGTTEDGIPVVPWLEAADKPTAMVFRKKATKKA 1790
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BLAST of mRNA_Ecto-sp13_S_contig9512.21122.1 vs. uniprot
Match: D7FHC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHC7_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 9.620e-37
Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0 
Query:    1 MLNVGRFQERAARSHDAPASGLRRTPRHVSTPNRDWLTSVEAAVIHLLCGVPRLRDELLNFEHQDVHKSWWATIKSWFIA 80
            ++ V   QERAARSH APASGLRRTPRHVSTP+RDWLTSVEAAVIHLLCGVPRLRDELL+FEHQDV+KSWWATIKSWFIA
Sbjct:  867 VVYVADRQERAARSHGAPASGLRRTPRHVSTPDRDWLTSVEAAVIHLLCGVPRLRDELLDFEHQDVYKSWWATIKSWFIA 946
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9512.21122.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FHD6_ECTSI1.900e-19089.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LGQ6_9PHAE3.530e-16186.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHC7_ECTSI9.620e-3787.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9512contigEcto-sp13_S_contig9512:200..5374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9512.21122.1mRNA_Ecto-sp13_S_contig9512.21122.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9512 200..5374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9512.21122.1 ID=prot_Ecto-sp13_S_contig9512.21122.1|Name=mRNA_Ecto-sp13_S_contig9512.21122.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=317bp
MLNVGRFQERAARSHDAPASGLRRTPRHVSTPNRDWLTSVEAAVIHLLCG
VPRLRDELLNFEHQDVHKSWWATIKSWFIAPRQRLERNFVLQLAAIARGL
WYNEISPDKIDLQQDPEPFDKDPSGIYVRIVELTNTIRRLLGLSRIFRTP
VPLVRDQHHMVLQVFLQALQNVLPLETMTFVDFREVRAYYKDNLVLVELH
EAPDLLFVVLDEQGRRDRKKRTERLQVMLFDTDVIVNYTPAAVLNGSIDG
DTVVSRVDLDDDLWYRCTGGNVTSKFVQLGAATGTTKDGIPVVPWLKAAD
KPTAMVFRKKATRKAI*
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