prot_Ecto-sp13_S_contig9498.21117.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig9498.21117.1
Unique Name	prot_Ecto-sp13_S_contig9498.21117.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	471

Homology

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BLAST of mRNA_Ecto-sp13_S_contig9498.21117.1 vs. uniprot
Match: D8LRC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC3_ECTSI)

HSP 1 Score: 801 bits (2069), Expect = 1.250e-288
Identity = 437/474 (92.19%), Postives = 451/474 (95.15%), Query Frame = 0

Query:    1 VNQKGGSAYIDLSQRLVLVENRPRLLELACSLVAPSLHPQPPSA---APAAAGMPAFVPGLVRKICSSDAPFPGKVVSRPCRVATEAKATVQQPSGWVSTMAQAWLSSAAGGGDAFSTITGXXXXGVCECAGRGPCTIRASPGREPCLHVEVGDVNKRGGRSXXXXXXXXXFSAESVESTSAVRLRTYSVATTTTGAASPRASSAEGRDAAAATAVSDALVALHAAAVRLGLPPSVAVPVYAAMLLAGVVLLLVAQPLSESRVFHYLLSALLGGVVGAAAVVLRAVKNPRRSLFRLLMLGGVVMWLVVAAGVDRIPSPAELLSNLPGVMLAFWRMGLSNFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGIFLVYNGVSDTDVGMALVVLALMAPTLAHYARRYNMWCNSSKWYRAGNQLSQEEYEAQGDAYTREAIAALRESTCNDWSLTKK 471
            VNQKGGSAY DLSQRLVLVENRPRLLELACSLVAP LHPQPP+A   A AAAGMPAFVPGLVRK+CSSDAPFPGKVVSRPCRVATEAKA+ QQPSGWVSTMAQAW+SSAAGGGDA S I  XXXX VCECAGRGPCTIRASPGREPCLHVEVGDV+KRGGRSXXXXXXXX FSAESVESTSAVRLRTYS+ATT  GAASPRASSA+GR++AAATAVSDALVALHA+AVRLGLPPSVAVPVYAAMLL GV LLLVAQPLSESR FHYLLSALLGGVVGAAA VLRAVKNPRRSL R LMLGGVV WLVVAAGVD IPSPAELLSNLPGVMLAFW+MGLS+FPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSG+FLVYNGVSDTDVGMALVVLALMAPTLAHYARRYNMWCNSS+WYRAGNQLSQEEYEAQGDAYTREAIAALRESTCNDWSLTKK
Sbjct:  117 VNQKGGSAYNDLSQRLVLVENRPRLLELACSLVAPPLHPQPPAAPATAAAAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKASAQQPSGWVSTMAQAWVSSAAGGGDAISAIXXXXXXXVCECAGRGPCTIRASPGREPCLHVEVGDVSKRGGRSXXXXXXXX-FSAESVESTSAVRLRTYSLATTAAGAASPRASSADGRESAAATAVSDALVALHASAVRLGLPPSVAVPVYAAMLLTGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAAVLRAVKNPRRSLLRFLMLGGVVTWLVVAAGVDHIPSPAELLSNLPGVMLAFWKMGLSSFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGVFLVYNGVSDTDVGMALVVLALMAPTLAHYARRYNMWCNSSRWYRAGNQLSQEEYEAQGDAYTREAIAALRESTCNDWSLTKK 589

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BLAST of mRNA_Ecto-sp13_S_contig9498.21117.1 vs. uniprot
Match: A0A6H5KR73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR73_9PHAE)

HSP 1 Score: 608 bits (1569), Expect = 5.990e-211
Identity = 341/404 (84.41%), Postives = 355/404 (87.87%), Query Frame = 0

Query:    1 VNQKGGSAYIDLSQRLVLVENRPRLLELACSLVAPSLHPQPPSAAPAAAGMPAFVPGLVRKICSSDAPFPGKVVSRPCRVATEAKATVQQPSGWVSTMAQAWLSSAA-GGGDAFSTITGXXXXGVCECAGRGPCTIRASPGREPCLHVEVGDVNKRGGRSXXXXXXXXXFSAESVESTSAVRLRTYSVATTTTGAASPRASSAEGRDAAAATAVSDALVALHAAAVRLGLPPSVAVPVYAAMLLAGVVLLLVAQPLSESRVFHYLLSALLGGVVGAAAVVLRAVKNPRRSLFRLLMLGGVVMWLVVAAGVDRIPSPAELLSNLPGVMLAFWRMGLSNFPWAGKAFFAASGLAGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGIFLVYNGVSDTDVGM 403
            VNQKGGSAY DLSQRLVLVENRPRLLELACSLVAPSLHPQPP+A+  AAGMPAFVPGLVRK+CSSDAPFPGKVVSRPCRVATEAKAT QQPSGWVSTMA AW+SSAA GGGDA      XXXX VCECAGRGPCTIRASPGREPCLHVEVGDVNKRGGRS         FSAESVESTSAVRLRTYS+ TT  GAASPRASSAEG+++AAATAV DALVALHAAAVRLG+PPS+AVPVYAAMLLAGV LLLVAQPLSESR FHYLLSALLGGVVGAAAVVLRAVKNP RSLFRLL+L GVV WLVVAAGVD IPSPAELLSNLPGVMLA WRM L + PWAGKAF AASGLAGVLTTWRQGLFLEEADE RGTW         VLT SGIFL+Y+GVSD DVGM
Sbjct:  308 VNQKGGSAYKDLSQRLVLVENRPRLLELACSLVAPSLHPQPPAASVTAAGMPAFVPGLVRKLCSSDAPFPGKVVSRPCRVATEAKATAQQPSGWVSTMAPAWVSSAAAGGGDAXXXXXXXXXXXVCECAGRGPCTIRASPGREPCLHVEVGDVNKRGGRSGGGGG----FSAESVESTSAVRLRTYSLPTTAAGAASPRASSAEGQESAAATAVLDALVALHAAAVRLGMPPSIAVPVYAAMLLAGVALLLVAQPLSESRAFHYLLSALLGGVVGAAAVVLRAVKNPHRSLFRLLVLSGVVTWLVVAAGVDHIPSPAELLSNLPGVMLACWRMELWSLPWAGKAFLAASGLAGVLTTWRQGLFLEEADETRGTW---------VLTLSGIFLLYSGVSDPDVGM 698

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig9498.21117.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig9498.21117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRC3_ECTSI	1.250e-288	92.19	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KR73_9PHAE	5.990e-211	84.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019358	NEMP family	PFAM	PF10225	NEMP	coord: 240..463 e-value: 4.3E-15 score: 56.1
IPR019358	NEMP family	PANTHER	PTHR13598	UNCHARACTERIZED	coord: 237..464
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 378..396
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 420..471
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 284..289
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 290..309
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..234
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 397..401
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 358..377
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 261..283
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 402..419
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 310..338
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 235..255
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 256..260
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 339..357
None	No IPR available	TMHMM	TMhelix		coord: 401..419
None	No IPR available	TMHMM	TMhelix		coord: 261..283
None	No IPR available	TMHMM	TMhelix		coord: 229..251
None	No IPR available	TMHMM	TMhelix		coord: 290..309

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig9498	contig	Ecto-sp13_S_contig9498:2118..5899 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig9498.21117.1	mRNA_Ecto-sp13_S_contig9498.21117.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig9498 2118..5899 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig9498.21117.1 ID=prot_Ecto-sp13_S_contig9498.21117.1|Name=mRNA_Ecto-sp13_S_contig9498.21117.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=471bp
VNQKGGSAYIDLSQRLVLVENRPRLLELACSLVAPSLHPQPPSAAPAAAG
MPAFVPGLVRKICSSDAPFPGKVVSRPCRVATEAKATVQQPSGWVSTMAQ
AWLSSAAGGGDAFSTITGGGGAGVCECAGRGPCTIRASPGREPCLHVEVG
DVNKRGGRSGGGGGGGGGFSAESVESTSAVRLRTYSVATTTTGAASPRAS
SAEGRDAAAATAVSDALVALHAAAVRLGLPPSVAVPVYAAMLLAGVVLLL
VAQPLSESRVFHYLLSALLGGVVGAAAVVLRAVKNPRRSLFRLLMLGGVV
MWLVVAAGVDRIPSPAELLSNLPGVMLAFWRMGLSNFPWAGKAFFAASGL
AGVLTTWRQGLFLEEADEARGTWFNGQACIRRVLTFSGIFLVYNGVSDTD
VGMALVVLALMAPTLAHYARRYNMWCNSSKWYRAGNQLSQEEYEAQGDAY
TREAIAALRESTCNDWSLTKK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019358	NEMP_fam