prot_Ecto-sp13_S_contig94907.21111.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94907.21111.1
Unique Nameprot_Ecto-sp13_S_contig94907.21111.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length74
Homology
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: D8LBT0_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT0_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 7.750e-45
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    2 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH
Sbjct:   29 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 101          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A6H5L3P5_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P5_9PHAE)

HSP 1 Score: 155 bits (391), Expect = 2.580e-43
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    2 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQV+GMEEMGNERAKAHFEAEVPASYTVPREH
Sbjct:   29 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVQGMEEMGNERAKAHFEAEVPASYTVPREH 101          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A836C8F7_9STRA (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F7_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.030e-32
Identity = 56/72 (77.78%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    2 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPRE 73
            EPRWASVNLGLFICL CSGIHRNLGVHISFVRSVNLDTWK  QV  ME +GN RAKA++EA VP    VP E
Sbjct:   29 EPRWASVNLGLFICLGCSGIHRNLGVHISFVRSVNLDTWKTEQVDKMERIGNARAKAYYEANVPPGTPVPTE 100          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A7S3UXM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXM8_HETAK)

HSP 1 Score: 111 bits (277), Expect = 1.250e-29
Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    2 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPRE 73
            EPRWAS  LG+F+C+ CSGIHRNLGVHISFVRSVNLD+W+   V+ ME  GN RA+A+FEAEVP++Y +P E
Sbjct:   42 EPRWASATLGVFMCIRCSGIHRNLGVHISFVRSVNLDSWREDHVQRMERWGNGRARAYFEAEVPSNYPIPGE 113          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: H3G6B5_PHYRM (Arf-GAP domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B5_PHYRM)

HSP 1 Score: 109 bits (273), Expect = 1.530e-29
Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    3 PRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAK ++EA VP  + +P EH
Sbjct:   21 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKGYYEANVPRDFRIPTEH 92          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: G5A4X3_PHYSP (Arf-GAP domain-containing protein (Fragment) n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A4X3_PHYSP)

HSP 1 Score: 110 bits (274), Expect = 3.880e-29
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    3 PRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKA++EA VP  Y +P EH
Sbjct:   40 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTSEQVQQMQRWGNARAKAYYEANVPRDYRIPTEH 111          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A7S2SRH8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRH8_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.130e-29
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 0
Query:    2 EPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPRE 73
            +PRWAS  LG+F+C+DCSGIHRNLGVHISFVRSVNLD+W P QV+ ME  GN RAKA++EAEVP +Y+ P+E
Sbjct:   36 QPRWASSKLGVFMCIDCSGIHRNLGVHISFVRSVNLDSWTPEQVEMMETWGNARAKAYYEAEVPENYSRPKE 107          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: M4C531_HYAAE (Arf-GAP domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C531_HYAAE)

HSP 1 Score: 113 bits (282), Expect = 2.830e-28
Identity = 49/72 (68.06%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    3 PRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W   QV+ M+  GN RAKAHFEA +P+ Y VP EH
Sbjct:   41 PRWASINLGVFICIACSGIHRSLGVHVTFVRSVNLDSWTTEQVQQMQRWGNARAKAHFEAALPSDYFVPSEH 112          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A3F2RQV0_9STRA (Arf-GAP domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RQV0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.900e-28
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    3 PRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASYTVPREH 74
            PRWAS+NLG+FIC+ CSGIHR+LGVH++FVRSVNLD+W P QV+ M+  GN RAKA++EA VP  Y +P EH
Sbjct:   39 PRWASINLGVFICIACSGIHRSLGVHLTFVRSVNLDSWTPEQVQQMQRWGNGRAKAYYEATVPRDYRIPTEH 110          
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Match: A0A7C9A342_OPUST (Arf-GAP domain-containing protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A342_OPUST)

HSP 1 Score: 104 bits (260), Expect = 1.890e-27
Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    3 PRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEEMGNERAKAHFEAEVPASY 68
            PRWASVNLG+FICL+CSGIHR+LGVHIS VRSV LDTW P QV  ++ MGNE++ A++EAE+P++Y
Sbjct:   39 PRWASVNLGIFICLNCSGIHRSLGVHISKVRSVTLDTWLPEQVAFLQSMGNEKSNAYWEAELPSNY 104          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94907.21111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBT0_ECTSI7.750e-45100.00Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L3P5_9PHAE2.580e-4398.63Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836C8F7_9STRA1.030e-3277.78Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S3UXM8_HETAK1.250e-2968.06Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
H3G6B5_PHYRM1.530e-2963.89Arf-GAP domain-containing protein n=1 Tax=Phytopht... [more]
G5A4X3_PHYSP3.880e-2965.28Arf-GAP domain-containing protein (Fragment) n=1 T... [more]
A0A7S2SRH8_9STRA9.130e-2970.83Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
M4C531_HYAAE2.830e-2868.06Arf-GAP domain-containing protein n=1 Tax=Hyaloper... [more]
A0A3F2RQV0_9STRA3.900e-2866.67Arf-GAP domain-containing protein n=1 Tax=Phytopht... [more]
A0A7C9A342_OPUST1.890e-2769.70Arf-GAP domain-containing protein n=1 Tax=Opuntia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 32..53
score: 40.91
coord: 11..28
score: 62.64
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 1..74
e-value: 3.5E-10
score: 49.8
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 2..69
e-value: 9.4E-28
score: 96.6
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 1..74
score: 21.074
IPR038508ArfGAP domain superfamilyGENE3D3.30.40.160coord: 1..73
e-value: 6.7E-32
score: 112.3
NoneNo IPR availablePANTHERPTHR45705:SF1ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN EFFECTOR PROTEIN 2coord: 2..71
NoneNo IPR availablePANTHERPTHR45705FAMILY NOT NAMEDcoord: 2..71
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94907contigEcto-sp13_S_contig94907:14..531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94907.21111.1mRNA_Ecto-sp13_S_contig94907.21111.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94907 14..531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94907.21111.1 ID=prot_Ecto-sp13_S_contig94907.21111.1|Name=mRNA_Ecto-sp13_S_contig94907.21111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=74bp
PEPRWASVNLGLFICLDCSGIHRNLGVHISFVRSVNLDTWKPAQVKGMEE
MGNERAKAHFEAEVPASYTVPREH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR038508ArfGAP_dom_sf
IPR037278ARFGAP/RecO