prot_Ecto-sp13_S_contig94843.21102.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94843.21102.1
Unique Nameprot_Ecto-sp13_S_contig94843.21102.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length57
Homology
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: D7G7J8_ECTSI (Nucleolar complex associated 2 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7J8_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.570e-22
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = 0
Query:    4 SLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            SL ++  CVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQH+TKDSVQAVRRWQ
Sbjct:  558 SLRVMEGCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHRTKDSVQAVRRWQ 611          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: B7FQ14_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ14_PHATC)

HSP 1 Score: 69.3 bits (168), Expect = 2.240e-12
Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P+L+ + +C+VELY +D  S+YQ+AF+YIRQL+LLLR AMQ KTK+S Q V  WQ
Sbjct:  434 PTLTFMGNCLVELYSLDYHSSYQHAFVYIRQLALLLRAAMQKKTKESFQQVFCWQ 488          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A9RN24_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RN24_PHYPA)

HSP 1 Score: 66.2 bits (160), Expect = 2.710e-11
Identity = 29/55 (52.73%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P +  ++SCVVELYG+D  S+YQ+AF++IRQL+++LR A+  KTK++ + V RWQ
Sbjct:  223 PRIHFMASCVVELYGIDSASSYQHAFIFIRQLAIVLRNALTMKTKEAFKQVYRWQ 277          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A2K1IFF0_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IFF0_PHYPA)

HSP 1 Score: 66.2 bits (160), Expect = 2.730e-11
Identity = 29/55 (52.73%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P +  ++SCVVELYG+D  S+YQ+AF++IRQL+++LR A+  KTK++ + V RWQ
Sbjct:  427 PRIHFMASCVVELYGIDSASSYQHAFIFIRQLAIVLRNALTMKTKEAFKQVYRWQ 481          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A1Z5J7C2_FISSO (Nucleolar complex protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7C2_FISSO)

HSP 1 Score: 65.9 bits (159), Expect = 3.730e-11
Identity = 31/57 (54.39%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 VCPSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            V P+L+ + +C+ ELY +D  S+YQ+AF+YIRQL+LLLR AM  KTK+++Q V  WQ
Sbjct:  447 VLPTLTFMGNCLCELYSLDHHSSYQHAFVYIRQLALLLRTAMYKKTKEAMQQVYHWQ 503          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A7S2S7C6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7C6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.730e-11
Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P+L+ + +CVVELY +D  S+YQ+AF+YIRQL+L LR A+Q KT DS + V  WQ
Sbjct:  444 PTLTFMGNCVVELYSLDFASSYQHAFVYIRQLALHLRTALQKKTPDSFRVVYCWQ 498          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A1E7FSB6_9STRA (Noc2-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSB6_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 5.090e-11
Identity = 31/55 (56.36%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P+L+ + +CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ KT +++ AV  WQ
Sbjct:  407 PTLTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQRKTPEAMGAVYCWQ 461          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A7S1D2V9_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2V9_CYCTE)

HSP 1 Score: 64.7 bits (156), Expect = 8.400e-11
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 VCPSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            V P+L+ + +CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ KT ++ Q V  WQ
Sbjct:  250 VLPTLTFMGNCVVELYTLDYHSSYQHAFVYIRQLALHLRSAMQKKTPEAFQVVYCWQ 306          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A448Z9V8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9V8_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 9.510e-11
Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    3 PSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            P+L+ + +CVVELY +D  S+YQ+AF+YIRQL+L LR AMQ KT +++ A+  WQ
Sbjct:  468 PTLTFMGNCVVELYSLDYHSSYQHAFIYIRQLALHLRTAMQKKTPEAMGAIYCWQ 522          
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Match: A0A7R9UBE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBE0_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 2.490e-10
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    6 SLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSVQAVRRWQ 57
            + ++SC+VE+YG+D+GS+YQ AFLYIRQL+L LR A   KTK+S   V  WQ
Sbjct:  178 AFMASCIVEMYGIDLGSSYQCAFLYIRQLALHLRTAYAKKTKESFAMVLSWQ 229          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94843.21102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7J8_ECTSI1.570e-2288.89Nucleolar complex associated 2 homolog n=2 Tax=Ect... [more]
B7FQ14_PHATC2.240e-1260.00Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A9RN24_PHYPA2.710e-1152.73Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A2K1IFF0_PHYPA2.730e-1152.73Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A1Z5J7C2_FISSO3.730e-1154.39Nucleolar complex protein 2 n=2 Tax=Fistulifera so... [more]
A0A7S2S7C6_9STRA3.730e-1156.36Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7FSB6_9STRA5.090e-1156.36Noc2-domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S1D2V9_CYCTE8.400e-1156.14Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A448Z9V8_9STRA9.510e-1154.55Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9UBE0_9STRA2.490e-1057.69Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005343Nucleolar complex protein 2PFAMPF03715Noc2coord: 3..57
e-value: 1.2E-16
score: 60.9
IPR005343Nucleolar complex protein 2PANTHERPTHR12687NUCLEOLAR COMPLEX 2 AND RAD4-RELATEDcoord: 4..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94843contigEcto-sp13_S_contig94843:232..402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94843.21102.1mRNA_Ecto-sp13_S_contig94843.21102.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94843 232..402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94843.21102.1 ID=prot_Ecto-sp13_S_contig94843.21102.1|Name=mRNA_Ecto-sp13_S_contig94843.21102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=57bp
VCPSLSLVSSCVVELYGMDVGSAYQNAFLYIRQLSLLLRRAMQHKTKDSV
QAVRRWQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005343Noc2