prot_Ecto-sp13_S_contig94838.21100.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94838.21100.1
Unique Nameprot_Ecto-sp13_S_contig94838.21100.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length169
Homology
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BLAST of mRNA_Ecto-sp13_S_contig94838.21100.1 vs. uniprot
Match: D8LP69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP69_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.520e-42
Identity = 76/88 (86.36%), Postives = 82/88 (93.18%), Query Frame = 0 
Query:   57 IMKKARDTHIGYNKSFVKINFRPLDWIRAPGEVQKIDIDGVDLPTIPVEKFGRIKEGFNIPNIPFDNIDIPALDIPTVNIKAPADIKE 144
            IMK+A++THIGYNK FVKINFRPL+WI APGEV+KIDID V+LPTIPVEKFGRIKE  NIPNIPFD IDIPALDIPTVNIKAPADIKE
Sbjct:  397 IMKRAKNTHIGYNKGFVKINFRPLNWISAPGEVKKIDIDEVELPTIPVEKFGRIKEDLNIPNIPFDQIDIPALDIPTVNIKAPADIKE 484
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BLAST of mRNA_Ecto-sp13_S_contig94838.21100.1 vs. uniprot
Match: Q8QNM9_ESV1K (EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNM9_ESV1K)

HSP 1 Score: 117 bits (292), Expect = 2.840e-27
Identity = 59/87 (67.82%), Postives = 67/87 (77.01%), Query Frame = 0 
Query:   57 IMKKARDTHIGYNKSFVKINFRPLDWIRAPGEVQKIDIDGVDLPTIPVEKFGRIKEGFNIPNIPFDNIDIPALDIPTVNIKAPADIK 143
            IM+K R+  +   K       R   WI+ PG+V+ I+IDGV+LPTIPVEKFGRIKEG NIPNIPF NIDIPALDIPTVNIKAPADIK
Sbjct:  397 IMEKVRNVKVPVIKK------RIFSWIKTPGKVRDINIDGVELPTIPVEKFGRIKEGLNIPNIPFKNIDIPALDIPTVNIKAPADIK 477
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94838.21100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LP69_ECTSI1.520e-4286.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
Q8QNM9_ESV1K2.840e-2767.82EsV-1-34 n=1 Tax=Ectocarpus siliculosus virus 1 (i... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94838contigEcto-sp13_S_contig94838:1..507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94838.21100.1mRNA_Ecto-sp13_S_contig94838.21100.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94838 1..531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94838.21100.1 ID=prot_Ecto-sp13_S_contig94838.21100.1|Name=mRNA_Ecto-sp13_S_contig94838.21100.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=169bp
METTNDVIKGAEIAVNTISCGINNALNKVGDGVNAVTKGVNSAVNKVIGP
VNSVVNIMKKARDTHIGYNKSFVKINFRPLDWIRAPGEVQKIDIDGVDLP
TIPVEKFGRIKEGFNIPNIPFDNIDIPALDIPTVNIKAPADIKEIDIPDI
NIPSVAIPVPRDVSMDDFE
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