prot_Ecto-sp13_S_contig948.21094.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig948.21094.1
Unique Nameprot_Ecto-sp13_S_contig948.21094.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length355
Homology
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BLAST of mRNA_Ecto-sp13_S_contig948.21094.1 vs. uniprot
Match: D7FTU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU7_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 6.660e-51
Identity = 108/162 (66.67%), Postives = 111/162 (68.52%), Query Frame = 0 
Query:  193 MPTVNVVSPAGKVVDSLATQAEIRGFHRSNTHQQASKESFTIDKDTSRRVLYEHLLSSLLGLFENEEESPKEHKGENFVLHGDGGNSSHSSDTEERKYLVWDIVISILGDSWSEIRKMATAHGRSLVEAFRPIEARALYLKAAARCNDSLLLPDPDNNQPCQ 354
            MPTVNVVSPAGKVV SLATQAEI G  RSNT Q ASKES TIDKDTSRRVLYE LLS LLGLFENEEESP E KGE  +L G+GGN SHSSD EER  LVW                                 ARALYLKAAARCNDSLLLP+PDNNQPCQ
Sbjct:    1 MPTVNVVSPAGKVVGSLATQAEICGLRRSNTRQ-ASKESSTIDKDTSRRVLYERLLSLLLGLFENEEESPTERKGEKVMLQGEGGNISHSSDAEERIDLVW---------------------------------ARALYLKAAARCNDSLLLPEPDNNQPCQ 128
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig948.21094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTU7_ECTSI6.660e-5166.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig948contigEcto-sp13_S_contig948:10317..12228 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig948.21094.1mRNA_Ecto-sp13_S_contig948.21094.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig948 10158..14964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig948.21094.1 ID=prot_Ecto-sp13_S_contig948.21094.1|Name=mRNA_Ecto-sp13_S_contig948.21094.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=355bp
MCHRARNRARKPLCPKSETDSWRVKADNSETVRTLQATDNLLYLSYGCED
GLSISVVLKSIAVLLGADVLHEPPPAMTTLQTEVYARDFAQENGPKMMPF
DDSDEIKHEQLLYRLRSSPSSWRRAGNMDGDNNPHISPEQQQDQRPLPLL
SLPPPVPPSTDAVSAGAKYADTSIVSGPMGHLDDEQDFSIPSMPTVNVVS
PAGKVVDSLATQAEIRGFHRSNTHQQASKESFTIDKDTSRRVLYEHLLSS
LLGLFENEEESPKEHKGENFVLHGDGGNSSHSSDTEERKYLVWDIVISIL
GDSWSEIRKMATAHGRSLVEAFRPIEARALYLKAAARCNDSLLLPDPDNN
QPCQ*
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