prot_Ecto-sp13_S_contig946.21072.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig946.21072.1
Unique Nameprot_Ecto-sp13_S_contig946.21072.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length275
Homology
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BLAST of mRNA_Ecto-sp13_S_contig946.21072.1 vs. uniprot
Match: D7FNY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNY0_ECTSI)

HSP 1 Score: 426 bits (1094), Expect = 1.120e-148
Identity = 230/249 (92.37%), Postives = 236/249 (94.78%), Query Frame = 0 
Query:    1 MTRVVLQHHAAAAARLFLRRAAAVNSSHLRPSSPMGASISQQQARTLHYTQCRSLSGTEKASTTSSRDDKDADATAETAPKTGTPPAAGAIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCITDYRRVRHELKLARVGLALAEMSFQRDAGRKGDSGGGGG-ANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG 248
            MTRVVLQHHAA  ARLFLRRAAAVNSSHLRPSSP GASISQQQARTLHYT+CRSLSG++KASTTSS DDKDADATA+ AP TGTPPAAG IFGNLPARTAAARAGRGCLIALPLAGIGFSAWTC+TDYRRVRHELKLARVGLALAEMS+QRDAGRKGD G     ANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG
Sbjct:    1 MTRVVLQHHAAXXARLFLRRAAAVNSSHLRPSSPTGASISQQQARTLHYTRCRSLSGSDKASTTSSSDDKDADATAQRAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCVTDYRRVRHELKLARVGLALAEMSYQRDAGRKGDGGXXXXDANSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARG 249
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BLAST of mRNA_Ecto-sp13_S_contig946.21072.1 vs. uniprot
Match: A0A6H5KN63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN63_9PHAE)

HSP 1 Score: 411 bits (1057), Expect = 1.170e-142
Identity = 229/272 (84.19%), Postives = 239/272 (87.87%), Query Frame = 0 
Query:    1 MTRVVLQHHAAAAARLFLRRAAAVNSSHLRPSSPMGASISQQQARTLHYTQCRSLSGTEKASTTSSRDDKDADATAETAPKTGTPPAAGAIFGNLPARTAAARAGRGCLIALPLAGIGFSAWTCITDYRRVRHELKLARVGLALAEMSFQRDAGRKGDSGGGGGA---NSATRPTFDASPARSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANR---------NAAEALARGEGGTGSSAPGDG 260
            MTR VLQHHA AAAR+FLRRAAA+NSSHLRP S  GASISQQQARTLHYTQCRSLSG++KAST +SRDDKDADATA+TAP TGTPPAAG IFGNLPARTAAARAGRGCLIALP+ GIGFSAWTC+TDYRRVRHELK A VGLALAEMSFQR+AGRKGDS         NSATRPT DASP RSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANR          AAEALARGEGGTG+SAP DG
Sbjct:   27 MTRDVLQHHAVAAARVFLRRAAAINSSHLRPPSLTGASISQQQARTLHYTQCRSLSGSDKASTMNSRDDKDADATAQTAPNTGTPPAAGGIFGNLPARTAAARAGRGCLIALPIVGIGFSAWTCVTDYRRVRHELKRACVGLALAEMSFQREAGRKGDSXXXXXXXXXNSATRPTLDASPVRSFSVALVADAGVLGFHLLAAYGLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRMRQISGRRRTAAEALARGEGGTGASAPSDG 298
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig946.21072.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNY0_ECTSI1.120e-14892.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KN63_9PHAE1.170e-14284.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..274
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig946contigEcto-sp13_S_contig946:10366..11190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig946.21072.1mRNA_Ecto-sp13_S_contig946.21072.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig946 9191..11190 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig946.21072.1 ID=prot_Ecto-sp13_S_contig946.21072.1|Name=mRNA_Ecto-sp13_S_contig946.21072.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=275bp
MTRVVLQHHAAAAARLFLRRAAAVNSSHLRPSSPMGASISQQQARTLHYT
QCRSLSGTEKASTTSSRDDKDADATAETAPKTGTPPAAGAIFGNLPARTA
AARAGRGCLIALPLAGIGFSAWTCITDYRRVRHELKLARVGLALAEMSFQ
RDAGRKGDSGGGGGANSATRPTFDASPARSFSVALVADAGVLGFHLLAAY
GLWHGWDPDPIVNAEIGNLVAAVVSTGGGLRGEYLAANRNAAEALARGEG
GTGSSAPGDGGGESSGGGSHESTV*
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