prot_Ecto-sp13_S_contig94578.21068.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94578.21068.1
Unique Nameprot_Ecto-sp13_S_contig94578.21068.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length69
Homology
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BLAST of mRNA_Ecto-sp13_S_contig94578.21068.1 vs. uniprot
Match: D8LML2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 4.280e-34
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 0 
Query:    1 KKKKKVSVTTVEGHGAYYNSTVGWDVFALLVIFLPTGYDKLKNVFALVLVCITTSLV--QDYPRCGRRNRA 69
            KKKKKVSVTTVEGHGAYYNS VGWDVF+LLVIFLPTGY+KLKN+FALV+ CIT SL   +DYPRCGRRNRA
Sbjct:    2 KKKKKVSVTTVEGHGAYYNSAVGWDVFSLLVIFLPTGYNKLKNLFALVM-CITASLPIHEDYPRCGRRNRA 71
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94578.21068.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LML2_ECTSI4.280e-3484.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94578contigEcto-sp13_S_contig94578:120..326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94578.21068.1mRNA_Ecto-sp13_S_contig94578.21068.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94578 120..326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94578.21068.1 ID=prot_Ecto-sp13_S_contig94578.21068.1|Name=mRNA_Ecto-sp13_S_contig94578.21068.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=69bp
KKKKKVSVTTVEGHGAYYNSTVGWDVFALLVIFLPTGYDKLKNVFALVLV
CITTSLVQDYPRCGRRNRA
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