prot_Ecto-sp13_S_contig9450.21061.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9450.21061.1
Unique Nameprot_Ecto-sp13_S_contig9450.21061.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length407
Homology
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A6H5JF87_9PHAE (Fip1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF87_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 1.460e-164
Identity = 352/400 (88.00%), Postives = 360/400 (90.00%), Query Frame = 0
Query:    2 VSTRGKKGGAEHPAPADAASDETNPQNPAKEEPADNIIETNPPPPATVEKTPEVSRLDASGSGDEAGTTHGLKGDVEVQSKPAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGPVGEGVVSPVSLQTEARAGSTSQDAHGGGEGEAARPSSPIVDSEAKTAAVKPTPDRSSTAQQPDVAGKPTGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GFRVVVGREVVAPAAAPVVPTKRFLRGTNTLVNATTTSGNTASSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAG 400
            VSTRG KG A HPAPADA SDETNP NPAKEEP DN I+TNP PPAT EKTPE+SRLDA GS DEAGTTH LKGDVEV++KPAAAAAXXX   XXXXXXXXXXXXXXXXXXXXXXXXXX     AGGGPVG G VSPVSLQ+EARAGSTSQDAHGGGEGE AR SSPIVDS AK AAVKP PDRSST QQPDVAGKPTGSQXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXX GFRVVVGRE VAPAAAPVVPTKRFLRGTNTLVN+TTTSG TA+SKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSR+ KSAG
Sbjct:    2 VSTRGNKGAAAHPAPADATSDETNPPNPAKEEPVDNNIKTNPTPPATAEKTPELSRLDAGGSSDEAGTTHRLKGDVEVRAKPAAAAAXXXNTVXXXXXXXXXXXXXXXXXXXXXXXXXX-----AGGGPVGAGDVSPVSLQSEARAGSTSQDAHGGGEGEGARFSSPIVDSAAKAAAVKPIPDRSSTTQQPDVAGKPTGSQXXXXXXXXXXXXXXXXXAREPEGDGXXXXXXXXXXXXXXXXXXXXXXXXDGFRVVVGREGVAPAAAPVVPTKRFLRGTNTLVNSTTTSGTTATSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRSGKSAG 396          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: D8LU95_ECTSI (Fip1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU95_ECTSI)

HSP 1 Score: 477 bits (1228), Expect = 6.020e-164
Identity = 357/405 (88.15%), Postives = 362/405 (89.38%), Query Frame = 0
Query:    2 VSTRGKKGGAEHPAPADAASDETNPQNPAKEEPADNIIETNPPPPATVEKTPEVSRLDASGSGDEAGTTHGLKGDVEVQSKPAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGPVGEGVVSPVSLQTEARAGSTSQDAHGGGEGEAARPSSPIVDSEAKTAAVKPTPDRSSTAQQPDVAGKPTGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFRVVVGREVVAPAAAPVVPTKRFLRGTNTLVNATTTSGNTASSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAGGRGGGN 406
            VSTRGKKG A HPAPADA SDETNP  PAKEEP DN I        T E+TPEVSR DA G+GDEAGTTHGLKGDVEV++KPAAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   GPVGEG VSPVS +TEARAGS SQDAHGGGEGE ARPSSPIVDS AK AAVKP PDRSSTAQQPDVAGKPTGSQXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXGFRVVVGRE VAPAAAPVVPTKRFLRGTNTLVNATTT G TASSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAGGR GGN
Sbjct:    2 VSTRGKKGAAAHPAPADATSDETNPPKPAKEEPVDNSIXXXXXXXXTAEETPEVSRPDAGGNGDEAGTTHGLKGDVEVRAKPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GPVGEGDVSPVSSRTEARAGSASQDAHGGGEGEGARPSSPIVDSAAKAAAVKPIPDRSSTAQQPDVAGKPTGSQXXXXXXXXXXXXXXXPAREPEGDGXXXXXXXXXXXXXXXXXXXXXXXXXGFRVVVGREAVAPAAAPVVPTKRFLRGTNTLVNATTTGGTTASSKPVSAAAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAGGRVGGN 403          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A835YKB3_9STRA (Fip1 motif-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKB3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.320e-16
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 0
Query:  326 EYPPTAELQQSTGKTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDR 388
            +YPP  ELQ   G++AF V +D +E+ PWR PGVD++DFFNYGFTE +WR Y   QLR RYD+
Sbjct:  206 DYPPLEELQLRYGRSAFGVRMDELEDTPWRRPGVDLSDFFNYGFTEGTWRAYLLAQLRLRYDK 268          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A7S4DHM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHM3_HETAK)

HSP 1 Score: 84.3 bits (207), Expect = 7.560e-15
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0
Query:  326 EYPPTAELQQSTGK--TAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYD 387
            E+PP     Q  GK  +AFD++IDG+++ PWR PGVDI+D+FNYG TE +WR YC KQL  RY+
Sbjct:  142 EFPPLPTELQHPGKRNSAFDIEIDGLDDHPWRRPGVDISDYFNYGLTEKTWREYCIKQLTLRYE 205          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A1V9YWA6_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YWA6_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 8.610e-15
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query:  319 KPSLKPGEYPPTAELQQSTG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 385
            +P +   +Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  115 QPRIPSDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDETSWRDYCAKQLQKR 185          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A1W0A514_9STRA (Pre-mRNA polyadenylation factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A514_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.010e-14
Identity = 39/64 (60.94%), Postives = 46/64 (71.88%), Query Frame = 0
Query:  326 EYPPTAELQQSTG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 385
            +Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  112 QYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDESSWRDYCTKQLQKR 175          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A067C040_SAPPC (Fip1 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C040_SAPPC)

HSP 1 Score: 84.0 bits (206), Expect = 2.260e-14
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  324 PGE-YPPTAELQQSTG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 385
            PG+ Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  120 PGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 186          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: T0QKY1_SAPDV (Fip1 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QKY1_SAPDV)

HSP 1 Score: 84.0 bits (206), Expect = 3.570e-14
Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 0
Query:  324 PGE-YPPTAELQQSTG----KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNR 385
            PG+ Y PT E     G    +TAFDVDID +EE+PWR PGVDI+D+FNYGF E SWR YC KQL+ R
Sbjct:  123 PGDQYEPTFEELSLLGIGGRRTAFDVDIDQLEEKPWRKPGVDISDYFNYGFDEASWRDYCAKQLQKR 189          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A8J5MI60_9STRA (Fip1 domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MI60_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.370e-14
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query:  339 KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSR 394
            +TAFDVDID +E++PWR PGVDI+D+FNYGF E SWR Y  +QLR R D  V +SR
Sbjct:  187 RTAFDVDIDLLEDRPWRKPGVDISDYFNYGFDEHSWREYAARQLRLRRDLAVEKSR 242          
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Match: A0A3F2RXC5_9STRA (Fip1 domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXC5_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.700e-13
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 0
Query:  339 KTAFDVDIDGMEEQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSR 394
            +TAFDVDID +E++PWR PGVDI+D+FNYGF E SWR Y  +QLR R D  V +SR
Sbjct:  180 RTAFDVDIDLLEDRPWRKPGVDISDYFNYGFDEHSWREYAARQLRLRRDLAVEKSR 235          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9450.21061.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JF87_9PHAE1.460e-16488.00Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LU95_ECTSI6.020e-16488.15Fip1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835YKB3_9STRA7.320e-1658.73Fip1 motif-domain-containing protein n=1 Tax=Tribo... [more]
A0A7S4DHM3_HETAK7.560e-1556.25Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1V9YWA6_9STRA8.610e-1556.34Pre-mRNA polyadenylation factor n=1 Tax=Achlya hyp... [more]
A0A1W0A514_9STRA2.010e-1460.94Pre-mRNA polyadenylation factor n=1 Tax=Thraustoth... [more]
A0A067C040_SAPPC2.260e-1461.19Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
T0QKY1_SAPDV3.570e-1461.19Fip1 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A8J5MI60_9STRA9.370e-1464.29Fip1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3F2RXC5_9STRA1.700e-1364.29Fip1 domain-containing protein n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007854Pre-mRNA polyadenylation factor Fip1 domainPFAMPF05182Fip1coord: 343..384
e-value: 1.4E-21
score: 75.7
NoneNo IPR availablePANTHERPTHR36884FAMILY NOT NAMEDcoord: 339..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9450contigEcto-sp13_S_contig9450:3..3391 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9450.21061.1mRNA_Ecto-sp13_S_contig9450.21061.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9450 2..3391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9450.21061.1 ID=prot_Ecto-sp13_S_contig9450.21061.1|Name=mRNA_Ecto-sp13_S_contig9450.21061.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=407bp
QVSTRGKKGGAEHPAPADAASDETNPQNPAKEEPADNIIETNPPPPATVE
KTPEVSRLDASGSGDEAGTTHGLKGDVEVQSKPAAAAAAAAAAAAGDTVS
GDDAAGSAEAKASESSKEGESQEAAAGGGPVGEGVVSPVSLQTEARAGST
SQDAHGGGEGEAARPSSPIVDSEAKTAAVKPTPDRSSTAQQPDVAGKPTG
SQQQQQSGAAQKRKRDTPAREQEGDGMVVEEEQGATAVVQADSSDDEDED
DGFRVVVGREVVAPAAAPVVPTKRFLRGTNTLVNATTTSGNTASSKPVSA
AAGIASLVPSKGAPVATAKPSLKPGEYPPTAELQQSTGKTAFDVDIDGME
EQPWRHPGVDIADFFNYGFTEDSWRVYCEKQLRNRYDRTVGRSRNAKSAG
GRGGGNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007854Fip1_dom