prot_Ecto-sp13_S_contig94401.21052.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94401.21052.1
Unique Nameprot_Ecto-sp13_S_contig94401.21052.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length81
Homology
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A6H5K262_9PHAE (AAA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K262_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 6.440e-35
Identity = 66/69 (95.65%), Postives = 69/69 (100.00%), Query Frame = 0
Query:   13 KIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +IIMLCGPPGLGKTTLAQVVAKHAGYRV+EINASDDRTASVLRQR+TEAMEGNTLLADKRPNLIVLDEV
Sbjct:  361 RIIMLCGPPGLGKTTLAQVVAKHAGYRVYEINASDDRTASVLRQRVTEAMEGNTLLADKRPNLIVLDEV 429          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A438BNS9_VITVI (Chromosome transmission fidelity protein 18-like n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438BNS9_VITVI)

HSP 1 Score: 97.4 bits (241), Expect = 1.880e-24
Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = 0
Query:   12 HKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +KI++LCGPPGLGKTTLA V AKH GYRV EINASDDR++S++  ++ + ++ N+++AD +PN +V+DE+
Sbjct:   25 YKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSIIEAKILDVVQMNSVMADSKPNCLVIDEI 94          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A5CB86_VITVI (AAA domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=A5CB86_VITVI)

HSP 1 Score: 96.3 bits (238), Expect = 2.040e-23
Identity = 40/70 (57.14%), Postives = 58/70 (82.86%), Query Frame = 0
Query:   12 HKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +KI++LCGPPGLGKTTLA V AKH GYRV EINASDDR++S +  ++ + ++ N+++AD +PN +V+DE+
Sbjct:   25 YKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSKPNCLVIDEI 94          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: F0W2X1_9STRA (Chromosome transmission fidelity protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2X1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 2.630e-23
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0
Query:   13 KIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            KII+LCGPPG GKTTLA ++AKHAGY   EINASDDRTA VLR ++  AME  +L  DKRPN I+LDE+
Sbjct:  295 KIILLCGPPGAGKTTLAHIIAKHAGYNAVEINASDDRTAQVLRNKIISAMEMQSLHKDKRPNCIILDEI 363          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A024GMS5_9STRA (AAA domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GMS5_9STRA)

HSP 1 Score: 100 bits (250), Expect = 4.900e-23
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    5 YHPHGTTHKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +H     +KII+LCGPPG GKTTLA ++A+HAGY   EINASDDRTA +LR ++  AME  +L  DKRPN I+LDE+
Sbjct:  278 HHDARPKYKIILLCGPPGTGKTTLAHIIARHAGYNPIEINASDDRTAQLLRNKIISAMEMQSLHKDKRPNCIILDEI 354          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: UPI0008FF87C7 (chromosome transmission fidelity protein 18 homolog n=1 Tax=Vitis vinifera TaxID=29760 RepID=UPI0008FF87C7)

HSP 1 Score: 94.0 bits (232), Expect = 5.920e-23
Identity = 39/70 (55.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:   12 HKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            ++I++LCGPPGLGKTTLA V AKH GYRV EINASDDR++S +  ++ + ++ N ++AD +PN +V+DE+
Sbjct:   25 YRILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNFVMADSKPNCLVIDEI 94          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A2I0K4E3_PUNGR (ATPase_AAA_core domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K4E3_PUNGR)

HSP 1 Score: 95.9 bits (237), Expect = 6.680e-23
Identity = 39/70 (55.71%), Postives = 57/70 (81.43%), Query Frame = 0
Query:   12 HKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            HKI++LCGPPGLGKTTLA V AKH GYRV EINASDDR++S +  ++ + ++ N+++AD +P  +++DE+
Sbjct:  115 HKILLLCGPPGLGKTTLAHVAAKHCGYRVVEINASDDRSSSTIEAKILDVVQMNSVMADSKPKCLIIDEI 184          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A0A0L6T5_CUCSA (AAA domain-containing protein n=5 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0L6T5_CUCSA)

HSP 1 Score: 100 bits (248), Expect = 9.160e-23
Identity = 46/81 (56.79%), Postives = 62/81 (76.54%), Query Frame = 0
Query:    1 EKSRYHPHGTTHKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +KSR  P    HKI++LCGPPGLGKTTLA V AKH GY V EINASDDR++S +  ++ +A++ N++L D RPN +V+DE+
Sbjct:  333 KKSRL-PSPPEHKILLLCGPPGLGKTTLAHVAAKHCGYHVVEINASDDRSSSTIESKILDAIQMNSVLGDARPNCLVIDEI 412          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: A0A4D9CU49_9STRA (AAA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU49_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 1.260e-22
Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 0
Query:   13 KIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            + I+L GPPG+GKTTLA V+A+H GYR  EINASDDR+A  LR++MT AME   +L DKRPN I+LDEV
Sbjct:  453 RAILLAGPPGIGKTTLAHVIAEHCGYRPLEINASDDRSAGALREKMTRAMENQAVLGDKRPNCIILDEV 521          
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Match: D7TTL7_VITVI (AAA domain-containing protein n=2 Tax=Vitis vinifera TaxID=29760 RepID=D7TTL7_VITVI)

HSP 1 Score: 93.6 bits (231), Expect = 2.260e-22
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 0
Query:   13 KIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRTASVLRQRMTEAMEGNTLLADKRPNLIVLDEV 81
            +I++LCGPPGLGKTTLA VVAKH GYRV EINASDDR++S +  ++ + ++ N ++AD +PN +V+DE+
Sbjct:   29 QILLLCGPPGLGKTTLAHVVAKHYGYRVVEINASDDRSSSTIEAKILDVVQMNFVMADSKPNCLVIDEI 97          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94401.21052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K262_9PHAE6.440e-3595.65AAA domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A438BNS9_VITVI1.880e-2457.14Chromosome transmission fidelity protein 18-like n... [more]
A5CB86_VITVI2.040e-2357.14AAA domain-containing protein n=2 Tax=Vitis vinife... [more]
F0W2X1_9STRA2.630e-2368.12Chromosome transmission fidelity protein putative ... [more]
A0A024GMS5_9STRA4.900e-2359.74AAA domain-containing protein n=2 Tax=Albugo candi... [more]
UPI0008FF87C75.920e-2355.71chromosome transmission fidelity protein 18 homolo... [more]
A0A2I0K4E3_PUNGR6.680e-2355.71ATPase_AAA_core domain-containing protein n=1 Tax=... [more]
A0A0A0L6T5_CUCSA9.160e-2356.79AAA domain-containing protein n=5 Tax=Benincaseae ... [more]
A0A4D9CU49_9STRA1.260e-2265.22AAA domain-containing protein n=1 Tax=Nannochlorop... [more]
D7TTL7_VITVI2.260e-2257.97AAA domain-containing protein n=2 Tax=Vitis vinife... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..81
e-value: 2.5E-23
score: 85.1
NoneNo IPR availablePANTHERPTHR23389:SF3CHROMOSOME TRANSMISSION FIDELITY PROTEIN 18 HOMOLOGcoord: 12..81
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 12..81
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 15..81
e-value: 6.1E-12
score: 46.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94401contigEcto-sp13_S_contig94401:7..249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94401.21052.1mRNA_Ecto-sp13_S_contig94401.21052.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94401 7..249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94401.21052.1 ID=prot_Ecto-sp13_S_contig94401.21052.1|Name=mRNA_Ecto-sp13_S_contig94401.21052.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=81bp
EKSRYHPHGTTHKIIMLCGPPGLGKTTLAQVVAKHAGYRVFEINASDDRT
ASVLRQRMTEAMEGNTLLADKRPNLIVLDEV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003959ATPase_AAA_core
IPR027417P-loop_NTPase