prot_Ecto-sp13_S_contig9439.21047.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9439.21047.1
Unique Nameprot_Ecto-sp13_S_contig9439.21047.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A6H5JPB7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB7_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 7.750e-118
Identity = 174/182 (95.60%), Postives = 180/182 (98.90%), Query Frame = 0
Query:    1 PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSE 182
            PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYG+GLLRRRLYWVIAGVL+AYWSREVLSMLIASPYASPLTLKMVA SSLYHVGKIILIS DAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLH+KLIIVSVVWA+HAIANLV++
Sbjct:  161 PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGVGLLRRRLYWVIAGVLSAYWSREVLSMLIASPYASPLTLKMVATSSLYHVGKIILISRDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHQKLIIVSVVWAMHAIANLVTK 342          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: D8LAY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY7_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 1.130e-117
Identity = 174/182 (95.60%), Postives = 178/182 (97.80%), Query Frame = 0
Query:    1 PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSE 182
            PAWLVVATF HEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKD LLC+KRMSLQGFDTATHALIVRDMVRWDEESA RTHGLHRKLI+VSVVWA+HAIANLV+ 
Sbjct:  161 PAWLVVATFAHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDVLLCLKRMSLQGFDTATHALIVRDMVRWDEESAERTHGLHRKLIVVSVVWAMHAIANLVTR 342          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A836C6P6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6P6_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.350e-68
Identity = 108/185 (58.38%), Postives = 138/185 (74.59%), Query Frame = 0
Query:    4 LVVATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQG-------FDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVS 181
            LV    VHEVW++LQH N+LLNPLCQRLDR YGI LL++R YWVIAGVL AYW RE+LSML A PY +PLT  M+A+S +YH+GKIIL+S+DAQR WSPT+GIMRLL+DHWH+ S  D ++  KR +LQ        FD+ TH LIVRD+V      +  +  L R ++I S+VWA+HA+AN+V+
Sbjct:   40 LVALLLVHEVWVMLQHLNVLLNPLCQRLDRGYGISLLKKRQYWVIAGVLGAYWLREILSMLAALPYTAPLTSNMIAVSCVYHLGKIILVSIDAQRGWSPTLGIMRLLIDHWHLRSLADLMISAKRFALQARQLSHCAFDSLTHVLIVRDLVSGRMTRSVASAELERLVVITSLVWALHALANVVT 224          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A7S4KNY6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KNY6_GUITH)

HSP 1 Score: 194 bits (493), Expect = 6.050e-57
Identity = 95/175 (54.29%), Postives = 126/175 (72.00%), Query Frame = 0
Query:    9 FVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQ 183
            F HEVW+ +QHAN+LLNP  QRLDR YGI LLR+R YWVIAGVL+AYW+REVLSM++   Y S  T  M+ +S +YH+ KI L+SLDA R++SP +GIM LL+D WH+ S  DAL+ +KR+ LQGFDTATH  IV DM+  D+E       L    + ++ VW +HA+A  V+++
Sbjct:  108 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKICLVSLDAARKFSPRLGIMSLLIDQWHLDSLVDALITLKRVLLQGFDTATHCKIVLDMISKDKE-------LLSFAVFIAAVWFVHALACQVTKK 275          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A812V2L4_9DINO (CER3 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V2L4_9DINO)

HSP 1 Score: 177 bits (448), Expect = 5.900e-48
Identity = 87/177 (49.15%), Postives = 115/177 (64.97%), Query Frame = 0
Query:    7 ATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQ 183
            A  +HE W+ LQH N+LLNP CQRLDR YGI +LR+  +WVIA VL  YW+REV SML+  PY +  +   V +S++YH  K+  I LDA R WSPT+GIM+LL+DHWH  +    L+ + R SLQG+DT  H  IVRD++       G    LH    I+ +VW +HA+ N VS+Q
Sbjct:   53 ALLLHEAWVTLQHGNVLLNPFCQRLDRRYGISMLRKGQHWVIASVLVMYWAREVASMLLCLPYITVYSQIAVFVSTIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFQTLGTQLVSLLRFSLQGYDTMVHVFIVRDLIHHGGLGTGYVKWLH----ILFLVWLLHAVLNQVSQQ 225          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A812Q1W1_9DINO (Hypothetical protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812Q1W1_9DINO)

HSP 1 Score: 169 bits (427), Expect = 7.650e-47
Identity = 82/174 (47.13%), Postives = 112/174 (64.37%), Query Frame = 0
Query:   10 VHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQ 183
            +HE W+ LQH N+LLNP CQRLDR+YGI +L++  +WVIA VL  YW+REV SML+  PY S  +   V +S++YH  K+  I LDA R WSPT+GIM+LL+DHWH  +    L+ + R  LQG+DT  H  IV D++       G    LH    ++ +VW +HA+ N  S+Q
Sbjct:   59 LHEAWVTLQHGNVLLNPFCQRLDRNYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLH----VLFLVWLLHAVLNQTSQQ 228          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A812Z067_9DINO (Hypothetical protein n=2 Tax=unclassified Symbiodinium TaxID=279888 RepID=A0A812Z067_9DINO)

HSP 1 Score: 166 bits (420), Expect = 3.360e-45
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = 0
Query:   10 VHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQ 183
            +HE W+ LQH N+LLNP CQRLDR YGI +L++  +WVIA VL  YW+REV SML+  PY +  +   V +S++YH  K+  I LDA R WSPT+GIM+LL+DHWH  +    L+ + R  LQG+DT  H  IV D++            LH    ++ +VW +HA+ N VS+Q
Sbjct:   61 LHEAWVTLQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYITVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFYTLGTQLVSLLRFLLQGYDTMVHVFIVSDLIHHGGLGTSYVWWLH----VLFLVWLLHAVLNQVSQQ 230          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A1Q9D0R3_SYMMI (Caroteno-chlorophyll a-c-binding protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D0R3_SYMMI)

HSP 1 Score: 167 bits (424), Expect = 9.240e-45
Identity = 81/174 (46.55%), Postives = 111/174 (63.79%), Query Frame = 0
Query:   10 VHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQ 183
            +HE W+ +QH N+LLNP CQRLDR YGI +L++  +WVIA VL  YW+REV SML+  PY S  +   V +S++YH  K+  I LDA R WSPT+GIM+LL+DHWH  +    L+ + R  LQG+DT  H  IV D++       G    LH    ++ +VW +HA+ N  S+Q
Sbjct:   59 LHEAWVTMQHGNVLLNPFCQRLDRKYGISMLQKGQHWVIASVLVMYWAREVASMLLCLPYISVYSQIAVFVSAIYHTVKMFNICLDAHRCWSPTLGIMKLLIDHWHFHTLGTQLVSLLRFVLQGYDTMVHVFIVSDLIHHGGLGTGYVWWLH----VLFLVWLLHAVLNQTSQQ 228          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: L1J6G4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J6G4_GUITC)

HSP 1 Score: 140 bits (353), Expect = 3.820e-35
Identity = 82/179 (45.81%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    9 FVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTM---GIMRLLMDHWHMSSFK-------DALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVSVVWAIHAIA 177
            F HEVW+ +QHAN+LLNP  QRLDR YGI LLR+R YWVIAGVL+AYW+REVLSM++   Y S  T  M+ +S +YH+ K+I  S D+   ++ T+   GIM LL+D WH+ S         DAL+ +KR+ LQ         IV DM+  D+E       L    + ++ VW +HA+A
Sbjct:  100 FAHEVWIFMQHANVLLNPYLQRLDRKYGIALLRKRFYWVIAGVLSAYWAREVLSMMLCYSYVSDATKTMIMMSCIYHIAKVIK-SFDSDE-FNDTLQRLGIMSLLIDQWHLDSLVVIHSLDVDALITLKRVLLQ---------IVLDMISKDKE-------LLSFAVFIAAVWFVHALA 260          
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Match: A0A7S3LJ98_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LJ98_9STRA)

HSP 1 Score: 139 bits (350), Expect = 8.550e-35
Identity = 79/189 (41.80%), Postives = 110/189 (58.20%), Query Frame = 0
Query:    3 WLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAGVLAAYWSREVLSMLIASPY-------ASPLTLKMVAISSLYHVGKIILISLDAQRRWSPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWDEESAGRTHGLHRKLIIVS------VVWAIHAIAN 178
            WL +  F HE W+ LQH N+L NPLCQRLDR YGI LL+   +W IAG L+AYW RE LSM +  P+       A   T  +V IS +YH  K   +  DA +R SPT GIMR+++D +++ + ++ +L   R+ LQGFDT  H LI+RD++  D  S   +  +    II +       +W +HA  N
Sbjct:   15 WLFLLLFCHEYWVYLQHCNVLANPLCQRLDRQYGIALLKSNQHWAIAGTLSAYWCRESLSMFLCLPFLQRSNPGAISTTQYLVLISLIYHTIKSRGVRRDALQRQSPTYGIMRVVIDKFYLHTRQEVVLTAVRLFLQGFDTWIHFLILRDLLL-DSSSVSASASVSTPPIITTWLHAIFAIWVLHAAMN 202          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9439.21047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5JPB7_9PHAE7.750e-11895.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LAY7_ECTSI1.130e-11795.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C6P6_9STRA1.350e-6858.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4KNY6_GUITH6.050e-5754.29Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A812V2L4_9DINO5.900e-4849.15CER3 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A812Q1W1_9DINO7.650e-4747.13Hypothetical protein n=1 Tax=Symbiodinium necroapp... [more]
A0A812Z067_9DINO3.360e-4546.55Hypothetical protein n=2 Tax=unclassified Symbiodi... [more]
A0A1Q9D0R3_SYMMI9.240e-4546.55Caroteno-chlorophyll a-c-binding protein n=1 Tax=S... [more]
L1J6G4_GUITC3.820e-3545.81Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S3LJ98_9STRA8.550e-3541.80Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 44..67
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9439contigEcto-sp13_S_contig9439:305..1793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9439.21047.1mRNA_Ecto-sp13_S_contig9439.21047.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9439 305..1793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9439.21047.1 ID=prot_Ecto-sp13_S_contig9439.21047.1|Name=mRNA_Ecto-sp13_S_contig9439.21047.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
PAWLVVATFVHEVWLLLQHANILLNPLCQRLDRSYGIGLLRRRLYWVIAG
VLAAYWSREVLSMLIASPYASPLTLKMVAISSLYHVGKIILISLDAQRRW
SPTMGIMRLLMDHWHMSSFKDALLCVKRMSLQGFDTATHALIVRDMVRWD
EESAGRTHGLHRKLIIVSVVWAIHAIANLVSEQHPTM*
back to top