prot_Ecto-sp13_S_contig9438.21043.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9438.21043.1
Unique Nameprot_Ecto-sp13_S_contig9438.21043.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length132
Homology
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BLAST of mRNA_Ecto-sp13_S_contig9438.21043.1 vs. uniprot
Match: D8LJ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ22_ECTSI)

HSP 1 Score: 233 bits (593), Expect = 4.560e-75
Identity = 126/131 (96.18%), Postives = 126/131 (96.18%), Query Frame = 0 
Query:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGXXXXSAGPDASAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRCASSR 131
            MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGXXXX  GPD SAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLR A SR
Sbjct:    1 MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGXXXXXXGPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSR 131
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BLAST of mRNA_Ecto-sp13_S_contig9438.21043.1 vs. uniprot
Match: A0A6H5L4I3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4I3_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.980e-55
Identity = 110/120 (91.67%), Postives = 110/120 (91.67%), Query Frame = 0 
Query:   15 LHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNNARASGXXXXSA---GPDASAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRCASSR 131
            LHRL LVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLN ARASGXXXX     GPD SAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLR A SR
Sbjct:  826 LHRLSLVWCERAAPPLLLADDSGEGGSLWRDCLAIVRNLTLLNTARASGXXXXXXXXXGPDGSAEEAIAKESAALCDNTVVLDGEGMRSALRLAAHPVNAPAKELLALLESLVLRAARSR 945
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9438.21043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LJ22_ECTSI4.560e-7596.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4I3_9PHAE1.980e-5591.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9438contigEcto-sp13_S_contig9438:132..939 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9438.21043.1mRNA_Ecto-sp13_S_contig9438.21043.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9438 132..960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9438.21043.1 ID=prot_Ecto-sp13_S_contig9438.21043.1|Name=mRNA_Ecto-sp13_S_contig9438.21043.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=132bp
MRLVRAKFLKDFAPLHRLGLVWCERAAPPLLLADDSGEGGSLWRDCLAIV
RNLTLLNNARASGGGGGSAGPDASAEEAIAKESAALCDNTVVLDGEGMRS
ALRLAAHPVNAPAKELLALLESLVLRCASSRL
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