prot_Ecto-sp13_S_contig9432.21037.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9432.21037.1
Unique Nameprot_Ecto-sp13_S_contig9432.21037.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length463
Homology
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A6H5KYC9_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYC9_9PHAE)

HSP 1 Score: 879 bits (2272), Expect = 7.240e-310
Identity = 446/474 (94.09%), Postives = 458/474 (96.62%), Query Frame = 0
Query:    1 QDLWDIKQAAYVFGGHRGPFGQLLLNILRGGLKAVITLLLVVMYWSDSEFFPYTAAVFFIIAAASEAVMLTELWWGIASYGKWGTSTQRSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFF------------NYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKREESLAMHHSRNNVARASGVSVNDRQANASRLRAKLAYHQAKFLLTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK 462
            +D+WDIKQAA+VFGGHRGPFGQLLLNI+RGGLKAVITLLLVVMYWSDSEFFPYTAAVFFIIAAASEAVMLTELWWGIASYGKWGTST+RSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFW +VL TKILFSYFVVIKKMTLATYTLN+ADPTDYDFGVLGTLEDTGNYLYI ALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFF            +YLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGK+IADDVAEIKREESLAMH SRNNVARASGVSVNDR+ANAS+LRAKLAYHQAKFLL+NGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK
Sbjct:  161 RDVWDIKQAAFVFGGHRGPFGQLLLNIVRGGLKAVITLLLVVMYWSDSEFFPYTAAVFFIIAAASEAVMLTELWWGIASYGKWGTSTKRSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWVIVLTTKILFSYFVVIKKMTLATYTLNEADPTDYDFGVLGTLEDTGNYLYIVALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFKRRSPPHQTNAPSYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKQIADDVAEIKREESLAMHQSRNNVARASGVSVNDREANASKLRAKLAYHQAKFLLSNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK 634          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: D7FPK0_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK0_ECTSI)

HSP 1 Score: 900 bits (2326), Expect = 9.380e-310
Identity = 454/462 (98.27%), Postives = 458/462 (99.13%), Query Frame = 0
Query:    1 QDLWDIKQAAYVFGGHRGPFGQLLLNILRGGLKAVITLLLVVMYWSDSEFFPYTAAVFFIIAAASEAVMLTELWWGIASYGKWGTSTQRSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKREESLAMHHSRNNVARASGVSVNDRQANASRLRAKLAYHQAKFLLTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK 462
            +DLWDIKQAAYVFGGHRGPFGQLLLNILRGGLKAVITLLLVVMYWSDSEFFPYTAAVFF+IAAASEAVMLTELWWGIASYGKWGTST+RSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVL TKILFSYFVVIKKMTLATYTLN+ADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARN NFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKREESLAMH SRNNV RASGVSVNDRQANASRLRAKLAYHQAKFLLTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK
Sbjct:  374 RDLWDIKQAAYVFGGHRGPFGQLLLNILRGGLKAVITLLLVVMYWSDSEFFPYTAAVFFVIAAASEAVMLTELWWGIASYGKWGTSTERSCAGGGFAACLPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLTTKILFSYFVVIKKMTLATYTLNEADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNVNFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKREESLAMHQSRNNVVRASGVSVNDRQANASRLRAKLAYHQAKFLLTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFASDVGQGGKGIGK 835          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A6H5L5X7_9PHAE (GT48 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5X7_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 5.550e-41
Identity = 115/371 (31.00%), Postives = 192/371 (51.75%), Query Frame = 0
Query:  109 WSF-IGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTD-YDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKK----IAD-----------------DVAEIKRE--------ESLAM-HHSRNNVARASGVSVNDRQANASRLRAKLAYHQAKFL--LTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLH 445
            WS  I  + G+++   Y ++  LP   K + Y LFW +VL+ K LF++F +I+ +  +T T+ D D +  YD G + +  DT N   +  +WL    +YF+D+Q+WF++  ++ +AC GV R VGE  + +++  +F  ++K FF YL  E Q    H RFA+VWNE+VDAMR+ED++ +RE   L+YF+++L  P +                    +  LLP FL+SG +Q +V++A DF ++    I D                 + AE ++         E+LAM  H    VARA+ + V        ++R  L   Q +FL  + + +D +       L  + F L++ LC+N+ +   +W L+
Sbjct:   32 WSIVINVLLGVDAAASYARIDRLPGKRKVILYSLFWTVVLSAKFLFNFFFMIRPLVGSTRTVWDLDMSGRYDLGFV-SFRDTHNVGILVGVWLSVAFVYFIDLQVWFIIAESVMSACYGVARHVGERLNPNEICGSFEKMYKIFFRYLDAEDQQK--HFRFAYVWNEVVDAMRKEDVIGDREMAGLKYFVVSLHRPNS--------------------VLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIENLAMPDHDEYGVARAADLKV------VKQMRT-LRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQNEAICAGMWELY 372          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: D7FXN7_ECTSI (1,3-beta-glucan synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXN7_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 1.990e-39
Identity = 114/371 (30.73%), Postives = 191/371 (51.48%), Query Frame = 0
Query:  109 WSF-IGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTD-YDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKK----IAD-----------------DVAEIKRE--------ESLAM-HHSRNNVARASGVSVNDRQANASRLRAKLAYHQAKFL--LTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLH 445
            WS  I  + G+++   Y ++  LP   K + Y LFW +VL+ K LF++F +I+ +  +T T+ + D +  YD G + +  DT N   +  +WL    +YF+D+Q+WF++  ++ +AC GV R VGE  + +++  +F  ++K FF YL  E Q    H RFA+VWNE+VDAMR+ED++ +RE   L+YF+++L  P +                    +  LLP FL+SG +Q +V++A DF ++    I D                 + AE ++         ES AM  H    VARA+ + V        ++R  L   Q +FL  + + +D +       L  + F L++ LC+++ +   LW L+
Sbjct:  517 WSIVINVLLGVDAAASYARIDRLPGKRKVLLYSLFWTVVLSAKFLFNFFFMIRPLVESTRTVWNLDISGRYDLGFV-SFRDTHNVGILVGVWLSVAFVYFIDLQVWFIIAESVMSACYGVARHVGERLNPNEICGSFEQMYKIFFRYLDAEDQQK--HFRFAYVWNEVVDAMRKEDVIGDREMAGLKYFVVSLHRPNS--------------------VLALLPGFLVSGKIQGSVKTARDFARQQDELIKDLVAVDAWGKGEDKGARYEAAERRKPATGFFDMIESFAMPDHDEYGVARAADLKV------VKQMRT-LRLEQKRFLRGMLSVSDAIREVAFLHLFLSVFFLVEHLCQSEAICAGLWELY 857          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A2K1JZ99_PHYPA (1,3-beta-glucan synthase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JZ99_PHYPA)

HSP 1 Score: 89.4 bits (220), Expect = 4.560e-15
Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = 0
Query:  138 AYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHL-------------HKEFFNYLKR-EMQSTTMHTR-FAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLP 302
            +YILFW LVLA K  FSYF+ I  M   T  + D    DY +  + + +   N L + +LW    +IYFLD+QIW+ V + +     G R  +GE+ S   +   FS L             H+EF    +  +M+   +  R FA +WNE++ ++REED++SN+ER  L    +N+  P
Sbjct:  707 SYILFWLLVLACKFSFSYFLQINTMVKPTRAIIDIKNIDYRWRDIFS-KSHHNALTLVSLWAPVVMIYFLDLQIWYTVISALVGGLNGARIGLGEIRSLHMLRTHFSSLPSAFTKRLQPNQPHQEFMAMRESADMRKPKLDARRFAPIWNEVIISLREEDLISNKER-DLLVMPLNISTP 884          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A2K1KNY9_PHYPA (1,3-beta-glucan synthase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KNY9_PHYPA)

HSP 1 Score: 89.4 bits (220), Expect = 4.570e-15
Identity = 56/165 (33.94%), Postives = 88/165 (53.33%), Query Frame = 0
Query:  138 AYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEF---------FNYLKREM----QSTTMHTRFAHVWNEIVDAMREEDILSNRER 289
            +Y++FWA+VLA K  FSYF+ IK M   T  + D    +Y +  + + +   N L +A+LW    +IYFLD+QIW+ V + +    +G R  +GE+     + R F  L   F         F    RE     +S     +FA +WNE++  +REED++SN+E+
Sbjct:  685 SYLVFWAIVLACKFSFSYFLQIKSMVGPTRIIIDLTDINYRWRDIVS-KSNHNALTLASLWAPVVMIYFLDLQIWYTVISALVGGFDGARIGLGEIRDLEMLRRRFFSLPSAFTTKLLPHESFQKNSRESVNNDESKVNAMKFAPIWNEVITCLREEDLISNKEK 848          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A1R3JM54_COCAP (1,3-beta-glucan synthase n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3JM54_COCAP)

HSP 1 Score: 84.7 bits (208), Expect = 1.360e-13
Identity = 72/275 (26.18%), Postives = 118/275 (42.91%), Query Frame = 0
Query:  100 LPSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHL-------------HKEFFNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKR 361
            L  +L    W+ I  +   +    Y        I   + Y +FW LVL+ K+ FSYFV I  +   T  +   D  DY    L       N   I A+W    L+YF+D+QIW+ +++ I     G  R +GE+ +   +   F  +             H       +R  +   M  +F+ +WNE + +MR ED++SNR+R      L+ L +P +D +             +W       P FL++  +  A+ +A ++  K   D AE+KR
Sbjct:  338 LREKLELSNWTIINIVMWWSQPKAYVGRGMHVGIFSLLKYAIFWILVLSVKLAFSYFVEILPLVRPTKAIMKIDIEDYQLHKL-VPNAKYNMGVIIAIWAPIVLVYFMDVQIWYTIFSTILGGVLGAFRHLGEIRTIGMLQSRFESMPSAFDRCFVSSSGHSSKIKNWRRSKEPKNM-AKFSWMWNEFIQSMRMEDLISNRDR-----DLLLLPVPLSDESMV-----------QW-------PLFLLASKIPEALNTAKEYKGK---DDAELKR 584          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: A0A397L2L3_BRACM (1,3-beta-glucan synthase (Fragment) n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A397L2L3_BRACM)

HSP 1 Score: 84.0 bits (206), Expect = 2.110e-13
Identity = 60/213 (28.17%), Postives = 99/213 (46.48%), Query Frame = 0
Query:  139 YILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYL---------KREMQSTTMHT---------------RFAHVWNEIVDAMREEDILSNRER---------------LQLRYFLINLRLPTADPNARNAN 312
            Y +FW L++ATK+ FSY++ IK +   T  +  A  TD+ +          N   + ALW    L+YF+D QIW+ +++ I     G  RR+GE+ +   +   F  L   F + L         K+ +++T  H                RFA +WN I+ + REED++S+RE                +Q   FL+  ++P A   A+++N
Sbjct:  379 YTMFWVLLIATKLTFSYYIEIKPLVAPTQAIMRARVTDFQWHEFFP-RAKNNIGVVIALWAPIILVYFMDSQIWYAIFSTIFGGIYGAFRRLGEIRTLGMLRSRFESLPGAFNDRLIPDGKNQQRKKGLRATLSHNFTEDKVPVNKEKEAARFAQLWNTIISSFREEDLISDREMDLLLVPYWADRDLDLIQWPPFLLASKIPIALDMAKDSN 590          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: UPI001036BC24 (callose synthase 10 isoform X1 n=3 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036BC24)

HSP 1 Score: 84.0 bits (206), Expect = 2.400e-13
Identity = 68/249 (27.31%), Postives = 113/249 (45.38%), Query Frame = 0
Query:  134 TKRVAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEFFNYL----KREMQSTTMHTR------------FAHVWNEIVDAMREEDILSNRERLQLRYFLINLRLPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGKKIADDVAEIKREESLA 366
            T  + Y+L+W ++ A K  F+YF+ IK +   T  +       Y +  L + ++  N+L IA+LW     IY +D+ IW+ + + +     G R R+GE+ S   V + F    + F   L     + M S+T  ++            F+  WNEI++++REED +SNRE+  L        +P+   + R           +W       P FL+S  +  A+  A D     AD    I R+E +A
Sbjct:  659 TDYLRYVLYWLVIFACKFTFAYFLQIKPLVSPTQIITHLPSLTYSWHDLMS-KNNNNFLTIASLWAPVVAIYLMDIHIWYTLLSAVVGGVMGARARLGEIRSLEMVHKRFESFPEAFVKNLVSPETKRMPSSTHSSQVPEDSNKTYAAIFSPFWNEIINSLREEDFISNREKDLLS-------MPSNTGSLRLV---------QW-------PLFLLSSKILLAIDLALDCKDTQADLWNRINRDEYMA 883          
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Match: UPI00053F35C8 (callose synthase 5 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F35C8)

HSP 1 Score: 84.0 bits (206), Expect = 2.400e-13
Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 0
Query:  137 VAYILFWALVLATKILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLGSGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHL--------------HKEFFNYLKREMQSTTMH----TRFAHVWNEIVDAMREEDILSNRE 288
            + Y LFW L+LA+KI FSYF++I+ +   T  + D +  DY +          NY  +A+LW    ++YF+D Q+W+ +++ I     G   R+GE+ + S +   F  L               K  F+  KR  ++         RFA +WNEI+ + REED++++RE
Sbjct:  660 IKYTLFWLLLLASKIAFSYFIMIRPLVKPTKDIMDINKVDYQWHEFFP-HAKHNYGAVASLWAPVIMVYFMDTQVWYSIYSTIYGGFIGAFDRLGEIRTLSMLRTRFQALPGAFNDCLVPSDKSRKRGFSLSKRFAEANASKRIEAARFAQLWNEIICSFREEDLVNDRE 828          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9432.21037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYC9_9PHAE7.240e-31094.091,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
D7FPK0_ECTSI9.380e-31098.271,3-beta-glucan synthase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L5X7_9PHAE5.550e-4131.00GT48 protein (Fragment) n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXN7_ECTSI1.990e-3930.731,3-beta-glucan synthase n=1 Tax=Ectocarpus silicu... [more]
A0A2K1JZ99_PHYPA4.560e-1534.441,3-beta-glucan synthase n=4 Tax=Physcomitrium pat... [more]
A0A2K1KNY9_PHYPA4.570e-1533.941,3-beta-glucan synthase n=4 Tax=Physcomitrium pat... [more]
A0A1R3JM54_COCAP1.360e-1326.181,3-beta-glucan synthase n=1 Tax=Corchorus capsula... [more]
A0A397L2L3_BRACM2.110e-1328.171,3-beta-glucan synthase (Fragment) n=1 Tax=Brassi... [more]
UPI001036BC242.400e-1327.31callose synthase 10 isoform X1 n=3 Tax=Camellia si... [more]
UPI00053F35C82.400e-1331.18callose synthase 5 n=1 Tax=Beta vulgaris subsp. vu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12741LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1coord: 26..366
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 160..190
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 191..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..75
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..462
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..45
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9432contigEcto-sp13_S_contig9432:573..6131 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9432.21037.1mRNA_Ecto-sp13_S_contig9432.21037.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9432 573..6131 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9432.21037.1 ID=prot_Ecto-sp13_S_contig9432.21037.1|Name=mRNA_Ecto-sp13_S_contig9432.21037.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=463bp
QDLWDIKQAAYVFGGHRGPFGQLLLNILRGGLKAVITLLLVVMYWSDSEF
FPYTAAVFFIIAAASEAVMLTELWWGIASYGKWGTSTQRSCAGGGFAACL
PSRLRQLGWSFIGSMSGINSVNLYTQVHSLPPITKRVAYILFWALVLATK
ILFSYFVVIKKMTLATYTLNDADPTDYDFGVLGTLEDTGNYLYIAALWLG
SGLIYFLDMQIWFVVWANIAAACEGVRRRVGELHSGSQVVRAFSHLHKEF
FNYLKREMQSTTMHTRFAHVWNEIVDAMREEDILSNRERLQLRYFLINLR
LPTADPNARNANFAPEAQEGEWGPLFTLLPEFLMSGAVQRAVQSASDFGK
KIADDVAEIKREESLAMHHSRNNVARASGVSVNDRQANASRLRAKLAYHQ
AKFLLTNGNDQVSSEMVRQLSATAFILMDALCRNDDLSRSLWNLHRALFA
SDVGQGGKGIGK*
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