prot_Ecto-sp13_S_contig9431.21035.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9431.21035.1
Unique Nameprot_Ecto-sp13_S_contig9431.21035.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length56
Homology
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: D8LKR5_ECTSI (Beta-Casp domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKR5_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.230e-28
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSRMLFDRWCTDD+NSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV
Sbjct:  218 MASPGMLQSGVSRMLFDRWCTDDKNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 273          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A6H5L755_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L755_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 1.100e-27
Identity = 54/56 (96.43%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSRMLFDRWCTDD+NSVLIPGYSVEGTLAKKLLS PDEVQGMDGRV
Sbjct:  389 MASPGMLQSGVSRMLFDRWCTDDKNSVLIPGYSVEGTLAKKLLSEPDEVQGMDGRV 444          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A836CKW9_9STRA (Cleavage and polyadenylation specificity factor subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.170e-25
Identity = 49/56 (87.50%), Postives = 52/56 (92.86%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LFDRWCTDD+N VLIPGYSVEGTLAKK+LS PDEV GMDGR+
Sbjct:  315 MASPGMLQSGVSRQLFDRWCTDDKNGVLIPGYSVEGTLAKKILSSPDEVTGMDGRI 370          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A1V9YBE6_9STRA (Cleavage and polyadenylation specificity factor subunit 3 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YBE6_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.170e-20
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWCTD RN+ LIPGY VEGTLAKK+LS P E+  MDGR+
Sbjct:  331 MASPGMLQSGVSRQLFERWCTDKRNACLIPGYVVEGTLAKKILSEPTEITAMDGRL 386          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A024GKB6_9STRA (Uncharacterized protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GKB6_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.190e-20
Identity = 43/56 (76.79%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D RN+ LIPGY VEGTLAKK+LS P E+  MDGRV
Sbjct:  332 MASPGMLQSGVSRQLFERWCSDKRNACLIPGYVVEGTLAKKILSEPTEIVAMDGRV 387          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A3R6ZRX1_9STRA (Beta-Casp domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZRX1_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.030e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D +N  LIPGY VEGTLAKK+LS+P E+  MDGR+
Sbjct:  288 MASPGMLQSGVSRQLFERWCSDKKNECLIPGYVVEGTLAKKILSLPKEITSMDGRL 343          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A397AFF0_9STRA (Beta-Casp domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AFF0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.460e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D +N  LIPGY VEGTLAKK+LS+P E+  MDGR+
Sbjct:  279 MASPGMLQSGVSRQLFERWCSDKKNECLIPGYVVEGTLAKKILSLPKEITSMDGRL 334          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A3R7ETK0_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7ETK0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 3.990e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D +N  LIPGY VEGTLAKK+LS+P E+  MDGR+
Sbjct:  140 MASPGMLQSGVSRQLFERWCSDKKNECLIPGYVVEGTLAKKILSLPKEITSMDGRL 195          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: W4GRG9_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=W4GRG9_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.080e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D +N  LIPGY VEGTLAKK+LS+P E+  MDGR+
Sbjct:  332 MASPGMLQSGVSRQLFERWCSDKKNECLIPGYVVEGTLAKKILSLPKEITSMDGRL 387          
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Match: A0A024TS72_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TS72_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.080e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQGMDGRV 56
            MASPGMLQSGVSR LF+RWC+D +N  LIPGY VEGTLAKK+LS+P E+  MDGR+
Sbjct:  332 MASPGMLQSGVSRQLFERWCSDKKNECLIPGYVVEGTLAKKILSLPTEITSMDGRL 387          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9431.21035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKR5_ECTSI1.230e-2898.21Beta-Casp domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L755_9PHAE1.100e-2796.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CKW9_9STRA2.170e-2587.50Cleavage and polyadenylation specificity factor su... [more]
A0A1V9YBE6_9STRA1.170e-2076.79Cleavage and polyadenylation specificity factor su... [more]
A0A024GKB6_9STRA2.190e-2076.79Uncharacterized protein n=2 Tax=Albugo TaxID=65356... [more]
A0A3R6ZRX1_9STRA3.030e-2073.21Beta-Casp domain-containing protein (Fragment) n=3... [more]
A0A397AFF0_9STRA3.460e-2073.21Beta-Casp domain-containing protein (Fragment) n=1... [more]
A0A3R7ETK0_9STRA3.990e-2073.21Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]
W4GRG9_9STRA4.080e-2073.21Uncharacterized protein n=5 Tax=Aphanomyces TaxID=... [more]
A0A024TS72_9STRA4.080e-2073.21Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.10890coord: 1..56
e-value: 1.2E-16
score: 62.7
NoneNo IPR availablePANTHERPTHR11203CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERcoord: 1..55
NoneNo IPR availablePANTHERPTHR11203:SF11CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 3coord: 1..55
IPR022712Beta-Casp domainPFAMPF10996Beta-Caspcoord: 1..42
e-value: 3.6E-13
score: 49.8
IPR036866Ribonuclease Z/Hydroxyacylglutathione hydrolase-likeSUPERFAMILY56281Metallo-hydrolase/oxidoreductasecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9431contigEcto-sp13_S_contig9431:427..1148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9431.21035.1mRNA_Ecto-sp13_S_contig9431.21035.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9431 427..1154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9431.21035.1 ID=prot_Ecto-sp13_S_contig9431.21035.1|Name=mRNA_Ecto-sp13_S_contig9431.21035.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=56bp
MASPGMLQSGVSRMLFDRWCTDDRNSVLIPGYSVEGTLAKKLLSMPDEVQ
GMDGRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022712Beta_Casp
IPR036866RibonucZ/Hydroxyglut_hydro