prot_Ecto-sp13_S_contig9428.21028.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9428.21028.1
Unique Nameprot_Ecto-sp13_S_contig9428.21028.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: D7FSF3_ECTSI (PsbP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSF3_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 8.980e-94
Identity = 179/188 (95.21%), Postives = 182/188 (96.81%), Query Frame = 0
Query:    1 MVKLRALGSACMTLVSGVQAFVPPSPXXXXXXXXXXXXXXXXXXXXXXXXXRLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASDVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            MVK+RALGSAC+TLVSGVQAFVP SP  XXXXXXXXXXXXXXXXXXXXXXXRLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSP TPG NAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEAS VSSRM+ESYTYKNSYVYDYIVDQEGRPEKHIK
Sbjct:    1 MVKIRALGSACVTLVSGVQAFVPSSPPAXXXXXXXXXXXXXXXXXXXXXXXRLDFLRGAXXXXXXXXXGFALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPTTPGANAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASGVSSRMLESYTYKNSYVYDYIVDQEGRPEKHIK 188          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A835ZDA3_9STRA (PsbP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA3_9STRA)

HSP 1 Score: 125 bits (313), Expect = 3.020e-33
Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 0
Query:   73 LPA-AGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASDVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            LPA A     + DD   F F+VP GW + + EISGRRK+V++TS  +   NAF+A TP RGDFT+LGSFGT DEVS+T++P    +S  M+   +  + Y YDYI+ QEGRPEKH+K
Sbjct:    8 LPALAAGTTEYVDDKFKFRFEVPAGWTQTETEISGRRKVVIWTSDGS--ANAFIAVTPVRGDFTSLGSFGTADEVSQTLIPNGKGISGEMLNVKSKNSMYYYDYIIAQEGRPEKHLK 122          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A6V1S113_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S113_HETAK)

HSP 1 Score: 119 bits (298), Expect = 4.350e-30
Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 0
Query:   73 LPA-AGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASDVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            LPA A +    TD    ++F VP GWE+++A ISG R + ++ +P  P  NAFVA TP RGD+T+LGSFG LD V  TV+P+   + SR +ES + + +Y YDY V QEGRPEK +K
Sbjct:   69 LPAVAEDLMKVTDTKGAYSFQVPPGWEKSEAAISGGRTVTIFAAPGRPAANAFVAATPLRGDYTSLGSFGNLDYVESTVVPKGPGIESRCLESRSQRGTYFYDYTVKQEGRPEKRLK 185          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A7S4EZ64_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4EZ64_CHRCT)

HSP 1 Score: 99.8 bits (247), Expect = 1.480e-22
Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   79 AQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLP---------EASDVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            A  + D   G +F VP GW   ++E+SG RK++  T PA    N FVA+TP RGD+T+LGSFG +D V  T+LP         E   +  +M+   T + +Y++DY+++Q G+P + ++
Sbjct:   62 ANEYVDQEYGVSFVVPSGWSPEESELSGGRKLLAATDPADTDFNLFVAFTPIRGDYTSLGSFGNIDFVGSTILPQCPNGACTLETDGIRGKMIAQSTGRGAYIFDYLIEQTGQPSRRLR 180          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A7S0LK65_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LK65_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 6.030e-20
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   80 QTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPE--------ASD-VSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            QT+ D   G +F +P GW   ++E+SG RK+V    P+    N F+AYTP   D+T+LGSFG +D V  T+LP+        ASD +  +M+   T  ++YV+DY ++Q G+P + ++
Sbjct:   77 QTYVDKEYGVSFGLPAGWNPTESELSGGRKLVAAADPSDVDFNIFIAYTPIAADYTSLGSFGNIDSVGLTLLPQCAGSSCSLASDGIQGKMISQATQSSAYVFDYSIEQIGQPIRRLR 194          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A7S2FED2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FED2_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.690e-19
Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 0
Query:   76 AGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASDVSSRMVESYTYKNSYVYDYIVDQEG-RPEKHI 187
            A  +QT++D A G +F VP  W ++  +I G RK+V+Y  P    TNAFV +TP   D+  LGSFGT+D V++TV+PE   + S +++S   K +Y +DY +     +P +H+
Sbjct:   59 AEESQTYSDLATGTSFSVPGTWSQS-VQILGDRKLVLYVDPENTETNAFVLFTPVAADYRGLGSFGTIDLVARTVIPEGPGIESNLLDSKQVKGNYFFDYTIKASADQPIRHL 170          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: B7FU11_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FU11_PHATC)

HSP 1 Score: 90.9 bits (224), Expect = 3.380e-19
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0
Query:   82 FTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVS-KTVLPEAS----DVSSRMVESYTYKNSYVYDY 175
            F D   GF  DVP  W R + ++S RR IVV+T PA    + FVAYTP R DFT+LGSFG++D+V+ +T+LP+A     DV + M+ + + K +Y +DY
Sbjct:   63 FLDSRHGFTVDVPSQWSRTEQQLSDRRTIVVWTDPADARASVFVAYTPVRDDFTSLGSFGSVDQVAAQTILPKAQIAGVDVEATMLAAVSQKQAYFFDY 161          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A0M0J7U2_9EUKA (Psbp domain-containing protein chloroplastic-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7U2_9EUKA)

HSP 1 Score: 89.7 bits (221), Expect = 8.080e-19
Identity = 42/119 (35.29%), Postives = 70/119 (58.82%), Query Frame = 0
Query:   81 TFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEAS-----------DVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            ++ D+  G +F +P+G+     E++  R++V  T P    TN F+A+TP R D+T+LGSFGT+D +  T+LP+             D+   M+E  + K S+VYDY + Q+G P +H++
Sbjct:   56 SYKDERYGVSFLLPEGYVMKPQELADGRRLVTATDPNDDTTNVFIAFTPIRPDYTSLGSFGTIDFIGSTLLPQCGSNGACAFASGDDIEGVMLEQASVKGSFVYDYTIQQQGGPMRHLR 174          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A7S1VTN5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VTN5_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.950e-18
Identity = 43/118 (36.44%), Postives = 74/118 (62.71%), Query Frame = 0
Query:   76 AGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKT-VLPEAS----DVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK 188
            A + +TF+D   GF   VP  WE ++ ++  RR+IV++  PA+  T  F A+TP R D+T+L SFG++++V++T +LP+      + +S M+ + + KN+Y +DY+    G PE H +
Sbjct:   94 AADWKTFSDADTGFQIQVPANWEMSEQKLPDRRRIVLFVDPASKDTLFFAAFTPIRDDYTSLSSFGSVNQVAETTILPKGEIMGEETTSEMLSAESKKNAYFFDYVAKPAGFPETHYR 211          
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Match: A0A7S2GEP3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEP3_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 9.220e-18
Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   71 ALLPAAGNAQTFTDDALGFNFDVPDGWERNDAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTVLPEASD-------VSSRMVESYTYKNSYVYDYIVDQEG-RPEKHI 187
            A+  A    Q + D   G  FDVP GW++ +  +SG RK+VVY  P    TNAFV +TP   D+T+LGSFG +D VS+ V+P  +          + ++E+   K +Y ++Y +  +  +P +H 
Sbjct:   83 AISRADDTLQNYKDLTYGATFDVPSGWQKTETNLSGDRKLVVYVDPKDDNTNAFVLFTPIAADYTSLGSFGNIDYVSRIVVPPQTKGFDGSALEKTNLIEAKQAKGNYFFEYTIQPDDTQPNRHF 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9428.21028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSF3_ECTSI8.980e-9495.21PsbP domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835ZDA3_9STRA3.020e-3352.14PsbP domain-containing protein (Fragment) n=1 Tax=... [more]
A0A6V1S113_HETAK4.350e-3049.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4EZ64_CHRCT1.480e-2237.82Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0LK65_9EUKA6.030e-2038.14Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2FED2_9STRA2.690e-1939.82Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B7FU11_PHATC3.380e-1946.46Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A0M0J7U2_9EUKA8.080e-1935.29Psbp domain-containing protein chloroplastic-like ... [more]
A0A7S1VTN5_9STRA6.950e-1836.44Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2GEP3_9STRA9.220e-1835.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 79..186
e-value: 1.7E-9
score: 38.0
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichGENE3D3.40.1000.10coord: 75..186
e-value: 1.6E-7
score: 33.3
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 80..186
NoneNo IPR availablePANTHERPTHR31407FAMILY NOT NAMEDcoord: 48..187
NoneNo IPR availablePANTHERPTHR31407:SF17PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTICcoord: 48..187
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..188
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.63
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..79
score: 8.032

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9428contigEcto-sp13_S_contig9428:504..4822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9428.21028.1mRNA_Ecto-sp13_S_contig9428.21028.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9428 504..4822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9428.21028.1 ID=prot_Ecto-sp13_S_contig9428.21028.1|Name=mRNA_Ecto-sp13_S_contig9428.21028.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=188bp
MVKLRALGSACMTLVSGVQAFVPPSPPAASSPPPPAMGGGQTASSSAAAA
SRLDFLRGAGAAAAAAAAGFALLPAAGNAQTFTDDALGFNFDVPDGWERN
DAEISGRRKIVVYTSPATPGTNAFVAYTPARGDFTTLGSFGTLDEVSKTV
LPEASDVSSRMVESYTYKNSYVYDYIVDQEGRPEKHIK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR016123Mog1/PsbP_a/b/a-sand
IPR006311TAT_signal