prot_Ecto-sp13_S_contig94247.21022.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94247.21022.1
Unique Nameprot_Ecto-sp13_S_contig94247.21022.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length174
Homology
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BLAST of mRNA_Ecto-sp13_S_contig94247.21022.1 vs. uniprot
Match: A0A367VY53_9PROT (Uncharacterized protein n=6 Tax=Thalassospira TaxID=168934 RepID=A0A367VY53_9PROT)

HSP 1 Score: 96.3 bits (238), Expect = 3.210e-20
Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0 
Query:   31 IDLRAGIMVIVEGSKERPVSKAADMTSTDLEGAMMWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH 174
            IDLRAGIMVIVEGS+ERPVSKAADMTS DLEGAMMW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH
Sbjct:  107 IDLRAGIMVIVEGSQERPVSKAADMTSADLEGAMMWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH 250
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BLAST of mRNA_Ecto-sp13_S_contig94247.21022.1 vs. uniprot
Match: A0A367X8N2_9PROT (Uncharacterized protein n=2 Tax=Thalassospira TaxID=168934 RepID=A0A367X8N2_9PROT)

HSP 1 Score: 75.5 bits (184), Expect = 8.260e-13
Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 0 
Query:   30 GIDLRAGIMVIVEGSKERPVSKAADMTSTDLEGAMMWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH 174
            GIDLRAGIMV++EGS+ERPV +  DMT+ DLEGAMM  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX SQ+NTS SIGGGT +APL DDIRDLVNGH
Sbjct:  106 GIDLRAGIMVVIEGSQERPVKRTTDMTNADLEGAMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQANTSYSIGGGTPTAPLADDIRDLVNGH 250
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BLAST of mRNA_Ecto-sp13_S_contig94247.21022.1 vs. uniprot
Match: A0A367WES4_9PROT (Uncharacterized protein n=1 Tax=Thalassospira profundimaris TaxID=502049 RepID=A0A367WES4_9PROT)

HSP 1 Score: 57.0 bits (136), Expect = 2.160e-6
Identity = 119/145 (82.07%), Postives = 128/145 (88.28%), Query Frame = 0 
Query:   30 GIDLRAGIMVIVEGSKERPVSKAADMTSTDLEGAMMWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH 174
            GIDLRAGIMV++EGS+ RPV K  DM++ DL       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  Q+NTS SIGGGT +APL +D+RDLVNGH
Sbjct:  106 GIDLRAGIMVVLEGSQHRPVKKTTDMSNADLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANTSYSIGGGTPTAPLAEDVRDLVNGH 250
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BLAST of mRNA_Ecto-sp13_S_contig94247.21022.1 vs. uniprot
Match: UPI00051A027C (pentapeptide repeat-containing protein n=2 Tax=Thalassospira TaxID=168934 RepID=UPI00051A027C)

HSP 1 Score: 55.8 bits (133), Expect = 5.390e-6
Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = 0 
Query:   34 RAGIMVIVEGSKERPVSKAADMTSTDLEGAMMWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSQSNTSNSIGGGTSSAPLVDDIRDLVNGH 174
            RAGIM++VEGS+ERPV KA DM++ DLE      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Q+NTS+SIGGG  + PLVDDIR+LVNGH
Sbjct:  110 RAGIMIVVEGSQERPVKKATDMSNADLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQANTSHSIGGGAPAEPLVDDIRELVNGH 250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94247.21022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A367VY53_9PROT3.210e-2097.92Uncharacterized protein n=6 Tax=Thalassospira TaxI... [more]
A0A367X8N2_9PROT8.260e-1388.28Uncharacterized protein n=2 Tax=Thalassospira TaxI... [more]
A0A367WES4_9PROT2.160e-682.07Uncharacterized protein n=1 Tax=Thalassospira prof... [more]
UPI00051A027C5.390e-683.69pentapeptide repeat-containing protein n=2 Tax=Tha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 93..157
e-value: 5.1E-19
score: 69.9
coord: 41..92
e-value: 9.4E-10
score: 39.7
NoneNo IPR availableGENE3D2.160.20.80coord: 1..40
e-value: 1.4E-7
score: 32.7
NoneNo IPR availablePANTHERPTHR14136UNCHARACTERIZEDcoord: 1..152
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 2..152
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 113..149
e-value: 6.1E-12
score: 44.9
coord: 1..34
e-value: 1.1E-9
score: 37.8
coord: 53..90
e-value: 7.3E-10
score: 38.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94247contigEcto-sp13_S_contig94247:13..534 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94247.21022.1mRNA_Ecto-sp13_S_contig94247.21022.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94247 13..534 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94247.21022.1 ID=prot_Ecto-sp13_S_contig94247.21022.1|Name=mRNA_Ecto-sp13_S_contig94247.21022.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=174bp
ADLERSSFQRADLRGANMARAKLRYANLSGIDLRAGIMVIVEGSKERPVS
KAADMTSTDLEGAMMWGANLTGARMSGASLSKTDLSDANMFAVNLEGADL
TGCNLNGAKLRNANLKGAKLAECNLVGADLSGANLRNVDMTNVDLSQSNT
SNSIGGGTSSAPLVDDIRDLVNGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat