prot_Ecto-sp13_S_contig9414.21012.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig9414.21012.1
Unique Nameprot_Ecto-sp13_S_contig9414.21012.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig9414.21012.1 vs. uniprot
Match: D7G5G6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G6_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 1.780e-122
Identity = 231/301 (76.74%), Postives = 240/301 (79.73%), Query Frame = 0
Query:    1 RREDKKRRRQEHNIRALERARWHPSTSGYLMQRLAVSASTTAIAAARANKREEGPKGKMILTDADFLDMNLTQVGSMTARGEHVVQDLPATNTGAPSNRRREARKAGLATALHFSLPTRLLQPRTKGAKLQASPSLPTLHSLRALAGVRSLGDLKRRLTALGTAARTATATPANQEQAIATEGGGTIGGNALSSMKTRAWKRKGKATVAEPGDTASKAEGEALANGDTPVPAIGVAVRTKNDETSTALGRQDGAAPAIAPAPADSPPTKNAEPTAEHDGATAATGKRSRDDHNKPSNDRGD 301
            RREDKKRRR+EHNIRALERARWHPSTSGYLMQRLAVSASTT IA ARAN+ EEGP+GKMILTDADFLD+NLTQ                                 GLATALHFSLP RLLQPRTK A L A+P LPT  SLRALAGVRSLGDLKR LTALGTAAR ATATPANQEQA+ATEGGGTIGGNALSSMK RAWKRK KAT AEP DTASK E EAL +GDTPVPA  VAVRT+NDETSTALGR DG APA AP  ADSPPT+NAEP AEHDGATAATGKRSRDDHNKPSND GD
Sbjct:  640 RREDKKRRRREHNIRALERARWHPSTSGYLMQRLAVSASTTVIATARANELEEGPEGKMILTDADFLDINLTQ-------------------------------GRGLATALHFSLPARLLQPRTKWAGLLAAPDLPTPPSLRALAGVRSLGDLKRELTALGTAARAATATPANQEQAMATEGGGTIGGNALSSMKARAWKRKIKATAAEPADTASKDE-EALVDGDTPVPATAVAVRTQNDETSTALGRPDGVAPAAAPPLADSPPTRNAEPPAEHDGATAATGKRSRDDHNKPSNDGGD 908          
BLAST of mRNA_Ecto-sp13_S_contig9414.21012.1 vs. uniprot
Match: A0A6H5KDY1_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDY1_9PHAE)

HSP 1 Score: 383 bits (984), Expect = 2.890e-120
Identity = 225/304 (74.01%), Postives = 239/304 (78.62%), Query Frame = 0
Query:    1 RREDKKRRRQEHNIRALERARWHPSTSGYLMQRLAVSASTTAIAAARANKREEGPKGKMILTDADFLDMNLTQVGSMTARGEHVVQDLPATNTGAPSNRRREARKAGLATALHFSLPTRLLQPRTKGAKLQASPSLPTLHSLRALAGVRSLGDLKRRLTALGTAARTATATPANQEQAIATEGGGTIGGNALSSMKTRAWKRKGKATVAEPGDTASKAEGEALANGDTPVPAIGVAVRTKNDETSTALGRQDGAAPAIAPAPADSPPTKNAEPTAEHDGATAATGKRSRDDHNKPSNDRGDSGS 304
            RREDKKRRRQEHNIRALERARWHPSTSGYLMQRLAVSASTTAIAAARAN+ EEGP+GKMILTDADFLDMNLTQ                                 GLAT +HF+LPT+L QPRTKGA+L A+PS          AGVRSLGDLKR LTALGTA RTATATPANQEQA+ TEGGGT+GGNALSSMKTRAWKRK KATVAE  DTASKA+G+ALA+G TPVPA    VRT+NDETSTALGRQD  A   APAPADSPPT+NAE  AEHDGATAATGKRSRDDHNKPSNDRGDSGS
Sbjct:  525 RREDKKRRRQEHNIRALERARWHPSTSGYLMQRLAVSASTTAIAAARANELEEGPEGKMILTDADFLDMNLTQ-------------------------------GRGLATPVHFNLPTKLFQPRTKGARLPAAPSXXXXXXXXXXAGVRSLGDLKRELTALGTATRTATATPANQEQAMTTEGGGTVGGNALSSMKTRAWKRKEKATVAESADTASKAKGKALADGGTPVPATXXXVRTENDETSTALGRQDSVA---APAPADSPPTRNAESRAEHDGATAATGKRSRDDHNKPSNDRGDSGS 794          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9414.21012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5G6_ECTSI1.780e-12276.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDY1_9PHAE2.890e-12074.01WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig9414contigEcto-sp13_S_contig9414:1..2307 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig9414.21012.1mRNA_Ecto-sp13_S_contig9414.21012.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig9414 1..2307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig9414.21012.1 ID=prot_Ecto-sp13_S_contig9414.21012.1|Name=mRNA_Ecto-sp13_S_contig9414.21012.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
RREDKKRRRQEHNIRALERARWHPSTSGYLMQRLAVSASTTAIAAARANK
REEGPKGKMILTDADFLDMNLTQVGSMTARGEHVVQDLPATNTGAPSNRR
REARKAGLATALHFSLPTRLLQPRTKGAKLQASPSLPTLHSLRALAGVRS
LGDLKRRLTALGTAARTATATPANQEQAIATEGGGTIGGNALSSMKTRAW
KRKGKATVAEPGDTASKAEGEALANGDTPVPAIGVAVRTKNDETSTALGR
QDGAAPAIAPAPADSPPTKNAEPTAEHDGATAATGKRSRDDHNKPSNDRG
DSGS
back to top