prot_Ecto-sp13_S_contig94098.21004.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig94098.21004.1
Unique Nameprot_Ecto-sp13_S_contig94098.21004.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length49
Homology
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: D7FVV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV7_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 8.620e-21
Identity = 44/46 (95.65%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 49
            H +SDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL
Sbjct:  103 HPDSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 148          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: A0A0L0S4E9_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S4E9_ALLM3)

HSP 1 Score: 63.5 bits (153), Expect = 1.710e-10
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 LLCHQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 49
            LL H++   R+LVACCL E+LRI+APDAPY DDQ+ A   L   QLR +
Sbjct:   65 LLNHRDRGVRILVACCLAEILRIYAPDAPYEDDQIKAIFELFALQLRAI 113          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: A0A8J5AGR1_9DIPT (Uncharacterized protein n=4 Tax=Bradysia TaxID=35571 RepID=A0A8J5AGR1_9DIPT)

HSP 1 Score: 63.2 bits (152), Expect = 2.340e-10
Identity = 27/47 (57.45%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTD-DQVLATLSLIITQLRGL 49
            HQ+ D +LL+ACC+ ++LR+FAPDAPY D DQV A  + +I QL GL
Sbjct:   62 HQSRDVQLLIACCIADILRVFAPDAPYKDPDQVKAIFNFLIRQLNGL 108          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: A0A0L0STY6_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0STY6_ALLM3)

HSP 1 Score: 62.8 bits (151), Expect = 3.190e-10
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 LLCHQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 49
            LL H++   R+LVACCL E+LRI+APDAPY DDQ+ A   L   Q+R +
Sbjct:   65 LLNHRDRGVRILVACCLAEILRIYAPDAPYEDDQIKAIFELFALQMRAI 113          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: A7RFN5_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RFN5_NEMVE)

HSP 1 Score: 62.4 bits (150), Expect = 4.370e-10
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 49
            H++   RL  ACCLV++LRI+AP+AP+  DQ+    SLII+QLRGL
Sbjct:   35 HKDKGVRLYAACCLVDILRIYAPEAPFNQDQMWEVFSLIISQLRGL 80          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: UPI0013905A82 (sister chromatid cohesion protein PDS5 homolog B n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI0013905A82)

HSP 1 Score: 62.4 bits (150), Expect = 4.370e-10
Identity = 26/46 (56.52%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL 49
            H++   RL  ACCLV++LRI+AP+AP+  DQ+    SLII+QLRGL
Sbjct:   68 HKDKGVRLYAACCLVDILRIYAPEAPFNQDQMWEVFSLIISQLRGL 113          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: UPI00083C6366 (sister chromatid cohesion protein PDS5 homolog B isoform X1 n=2 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C6366)

HSP 1 Score: 62.0 bits (149), Expect = 5.980e-10
Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = 0
Query:    2 LCHQNSDYRLLVACCLVEVLRIFAPDAPYTD-DQVLATLSLIITQLRGL 49
            LCH + D +LL+ACC+ +VLR++AP+APY D DQV      +ITQL GL
Sbjct:   59 LCHASRDVQLLIACCIADVLRVYAPEAPYKDTDQVKTIFLFLITQLSGL 107          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: A0A8J2PR69_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2PR69_9HEXA)

HSP 1 Score: 62.0 bits (149), Expect = 5.980e-10
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTD-DQVLATLSLIITQLRGL 49
            HQ+ D RLLVACC+ ++LRI+AP+APY D +QV      +ITQL GL
Sbjct:   76 HQSKDVRLLVACCIADILRIYAPEAPYKDQEQVKTIFKFLITQLEGL 122          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: V4BXW2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4BXW2_LOTGI)

HSP 1 Score: 61.2 bits (147), Expect = 6.180e-10
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTD-DQVLATLSLIITQLRGL 49
            HQN D RLLVACC+ +V R+FAP+AP+ D DQ+      +I QLRGL
Sbjct:   24 HQNKDVRLLVACCIADVFRVFAPEAPFNDNDQLKDIFMFLIKQLRGL 70          
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Match: UPI001EE60B77 (sister chromatid cohesion protein PDS5 homolog B-like isoform X3 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE60B77)

HSP 1 Score: 61.6 bits (148), Expect = 8.170e-10
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    4 HQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSL-IITQLRGL 49
            HQN D RLLVACC+ +V RIFAP+APY D   L  + L +I QLRGL
Sbjct:   66 HQNKDVRLLVACCIADVFRIFAPEAPYKDQDHLKEIFLFLIKQLRGL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig94098.21004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVV7_ECTSI8.620e-2195.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0L0S4E9_ALLM31.710e-1057.14Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A0A8J5AGR1_9DIPT2.340e-1057.45Uncharacterized protein n=4 Tax=Bradysia TaxID=355... [more]
A0A0L0STY6_ALLM33.190e-1055.10Uncharacterized protein n=1 Tax=Allomyces macrogyn... [more]
A7RFN5_NEMVE4.370e-1056.52Predicted protein n=1 Tax=Nematostella vectensis T... [more]
UPI0013905A824.370e-1056.52sister chromatid cohesion protein PDS5 homolog B n... [more]
UPI00083C63665.980e-1055.10sister chromatid cohesion protein PDS5 homolog B i... [more]
A0A8J2PR69_9HEXA5.980e-1057.45Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
V4BXW2_LOTGI6.180e-1057.45Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI001EE60B778.170e-1061.70sister chromatid cohesion protein PDS5 homolog B-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039776Sister chromatid cohesion protein Pds5PANTHERPTHR12663ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATEDcoord: 1..49
NoneNo IPR availablePANTHERPTHR12663:SF0PDS5, ISOFORM Acoord: 1..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig94098contigEcto-sp13_S_contig94098:223..369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig94098.21004.1mRNA_Ecto-sp13_S_contig94098.21004.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig94098 223..369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig94098.21004.1 ID=prot_Ecto-sp13_S_contig94098.21004.1|Name=mRNA_Ecto-sp13_S_contig94098.21004.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=49bp
LLCHQNSDYRLLVACCLVEVLRIFAPDAPYTDDQVLATLSLIITQLRGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039776Pds5