prot_Ecto-sp13_S_contig9401.20998.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig9401.20998.1 vs. uniprot
Match: D8LG58_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG58_ECTSI) HSP 1 Score: 1139 bits (2946), Expect = 0.000e+0 Identity = 648/737 (87.92%), Postives = 672/737 (91.18%), Query Frame = 0
Query: 1 MTLDGAAGGIDERSGRLHLDMAQEDLDEELRTQPLLDSVRSLVNKERQLAGLQLKEKEREAELWRDRFRQLQASSFFFHIESGGIDSGAPEAGETIATESWHRDEEDSDWDNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDACVQPLKSLMALRQLCRLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGACRHLWSLSVTLDDFDGNFFMNGPRKTKAKTAGGGRTPTGTGRSTRKAAGPPPXXXXXXXXXXMNALALARAFHPRAPNGGAGALLNGDGESEANSRGVRGDTRRGSVRVGRGSITSLGLPYARLHPRTVEELAAHAVSSLTSLDLSFCFIGPAGAVALARALDGDGGSSSTGNGTRGRGSRSLRSLKLPHNTVGDTGAHALGRSLSNNRFLTFXXXXXXXXXXXXXXXXAAAVGSRGNDGSGSVLRRLDVGDNPLEGEAARLLVAAAACDAPTNGHGGKDDDGTTRGTTTLRVLGLDRALGAAVATREAAXXXXXXXXXXXXXXTTTLVTIGNEVSVQPEDAIGNDGLVQVYQVLLDSRFETPADGSFTIRGGARGRGATLDIQWNFATAWLDPCWWRVSQTREGHPEFSVKEGIGTEEGWVSGQANNDGAEMRDGYRCQRLGARSTQESSARRLNGPRPISMQRVEKTRRSQGFRPTSDRQRRWAHEVL 737
M LDGAAGGIDE SGRLHLDMAQEDL+EELRTQPLLDSVRSLVNKERQLAGLQL+EKEREAELWRDRFRQLQ IESGGIDS A EAGETIATESWHRDEEDSDWDNLQAASKKAGD YLGKLRRQ+SLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLR N+IDDACVQPLKSLMALRQLC QLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGL+AAIKAG CRHLWSLSVTLDDFDGNFFMN PRKTKAKTAGGG T TGTGRSTRKAAGPPPXXXXXXXXXX NALALARAFHPRAP+GGAGALLN DGESEANSRGVRG+T+RGS RVGRGSITSLGLPYARLHPRTVEELAAHA+SSLT LDLSFC+IGPAGAVALAR LDG G SS G+GT GRGSRSLRSL+LPHN VGDTGAHALG+SLS+NR XXXXXXXXXXXXXXXXAAAVGSRGNDG GSVL RLD+GDNPLEGEAARLLVAAA APT+GHGGKD DGTTRG TTL+VLGLDRALGAAVATREAAXXXXXXXXXXXXXX TLV IGNEVSVQPEDAIGN GLVQVYQVLLDSRFE PAD FTIRGGA+GRGATLDI+W+ AT WLDPCWWRVSQTR+G PE SVKEG+GTEEGWVSGQAN+DG E+RDGYRCQRLGA STQESS RRLN PRPISMQRVEKTR SQGFRP SD QRRWA EVL
Sbjct: 10 MILDGAAGGIDEGSGRLHLDMAQEDLEEELRTQPLLDSVRSLVNKERQLAGLQLEEKEREAELWRDRFRQLQ-------IESGGIDSAAREAGETIATESWHRDEEDSDWDNLQAASKKAGDRYLGKLRRQESLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRGNNIDDACVQPLKSLMALRQLCXXXXXXXQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLKAAIKAGGCRHLWSLSVTLDDFDGNFFMNAPRKTKAKTAGGGPTATGTGRSTRKAAGPPPXXXXXXXXXXXNALALARAFHPRAPDGGAGALLNEDGESEANSRGVRGNTKRGSARVGRGSITSLGLPYARLHPRTVEELAAHAISSLTHLDLSFCYIGPAGAVALARGLDGHDGGSSRGSGTHGRGSRSLRSLQLPHNAVGDTGAHALGQSLSSNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATRQAPTDGHGGKDGDGTTRGATTLQVLGLDRALGAAVATREAAXXXXXXXXXXXXXXXXTLVAIGNEVSVQPEDAIGNGGLVQVYQVLLDSRFEMPADEIFTIRGGAKGRGATLDIEWSCATDWLDPCWWRVSQTRKGQPELSVKEGVGTEEGWVSGQANHDGGELRDGYRCQRLGAPSTQESSTRRLNRPRPISMQRVEKTRHSQGFRPASDWQRRWAREVL 739
BLAST of mRNA_Ecto-sp13_S_contig9401.20998.1 vs. uniprot
Match: A0A6H5K012_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K012_9PHAE) HSP 1 Score: 1040 bits (2688), Expect = 0.000e+0 Identity = 615/766 (80.29%), Postives = 630/766 (82.25%), Query Frame = 0
Query: 1 MTLDGAAGGIDERSGRLHLDMAQEDLDEELRTQPLLDSVRS--------------------------------------------------------------LVNKERQLAGLQLKEKEREAELWRDRFRQLQASSFFFHIESGGIDSGAPEAGETIATESWHRDEEDSDWDNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDACVQPLKSLMALRQLCRLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGACRHLWSLSVTLDDFDGNFFMNGPRKTKAKTAGGGRTPTGTGRSTRKAAGPPPXXXXXXXXXXMNALALARAFHPRAPNGGAGALLNGDGESEANSRGVRGDTRRGSVRVGRGSITSLGLPYARLHPRTVEELAAHAVSSLTSLDLSFCFIGPAGAVALARALDGDGGSSSTGNGTRGRGSRSLRSLKLPHNTVGDTGAHALGRSLSNNRFLTFXXXXXXXXXXXXXXXXAAAVGSRGNDGSGSVLRRLDVGDNPLEGEAARLLVAAAACDAPTNGHGGKDDDGTTRGTTTLRVLGLDRALGAAVATREAAXXXXXXXXXXXXXXTTTLVTIGNEVSVQPEDAIGNDGLVQV--------YQVLLDSRFETPADGSFTIRGGARGRGATLDIQWNFATAWLDPCWWRVSQTREGHPEFSVKEGIGTEEGWVSGQANNDGAEMRDGYRCQRLGARSTQE 696
M LDGAAGGIDE SGRLHLDMAQEDLDEELRTQPLLDSVRS LVNKERQLAGLQL+EKEREAELWRDRFRQLQAS FF H+ W DE D DNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDD CVQPLKSLMALRQLC LDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAG CR LWSLSVTLDDFDG FFMN PRKTKA+TAGGG TGTGRS RKAAGPPP XXXXXXXXX NALALARAFHPRAP+GGAGA LNGDGESEANSRGVRG+TRRGS RVGRGSITSLGLPYARLHP+TVEELAAHAVSSLTSLDLSFC+IGPAGAV LARALDGD GSS G+GTRG+GSRSLRSLKLPHN VGDTGAHALGRSLSNNR XXXXXXXXXXXXXXXXAAAVGSRGNDG GSVL RLD+GDNPLEGEAARLLVAAA CDAPT GHGG D DGTTRGTTTL+VLGLDRALG AVATREA XXXXXXXXXXXXX TTTLVTIGNEVSVQPEDAIGNDGLVQV YQVLLDSRFETPAD FTIRGGARGRGATL+IQW+FAT WLDPCWWRVSQTREG PEFSVKEG+G+EEGWVSGQANNDGAEMRDGYRCQRLGARSTQE
Sbjct: 10 MILDGAAGGIDEGSGRLHLDMAQEDLDEELRTQPLLDSVRSNDIASSSFLQRDQNPKLKRGANGTTSSTTTDDHLVGRSVFCTIVYACADNSSIRLPLLFLEGLVNKERQLAGLQLEEKEREAELWRDRFRQLQASPFFVHV--------------------W--DEWDVQ-DNLQAASKKAGDPYLGKLRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDTCVQPLKSLMALRQLCSLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGGCRRLWSLSVTLDDFDGKFFMNAPRKTKAETAGGGPKATGTGRSLRKAAGPPPAXXXXXXXXXXNALALARAFHPRAPDGGAGAFLNGDGESEANSRGVRGNTRRGSARVGRGSITSLGLPYARLHPKTVEELAAHAVSSLTSLDLSFCYIGPAGAVTLARALDGDDGSSRRGSGTRGQGSRSLRSLKLPHNAVGDTGAHALGRSLSNNRCXXXXXXXXXXXXXXXXXXXAAAVGSRGNDGGGSVLTRLDMGDNPLEGEAARLLVAAATCDAPTKGHGGTDGDGTTRGTTTLQVLGLDRALGTAVATREAXXXXXXXXXXXXXXTTTTLVTIGNEVSVQPEDAIGNDGLVQVGTRVNTMVYQVLLDSRFETPADEIFTIRGGARGRGATLEIQWSFATDWLDPCWWRVSQTREGRPEFSVKEGVGSEEGWVSGQANNDGAEMRDGYRCQRLGARSTQE 752
BLAST of mRNA_Ecto-sp13_S_contig9401.20998.1 vs. uniprot
Match: A0A7S2WJM3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJM3_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.550e-10 Identity = 96/333 (28.83%), Postives = 134/333 (40.24%), Query Frame = 0
Query: 128 LRRQDSLDLSRRGIGKEDLEGIVVKLRWLRGFTSVDLRDNSIDDACVQPLKSLMALRQLCRLDLRGNQLGPSSGNALLESLSRCRRLQVLRLEANGLFARTPGAGARLAAGLRAAIKAGACRHLWSLSVTLDDFDGNFFMNGPRKTKAKTAGGGRTPTGTGRSTRKAAGPPPXXXXXXXXXXMNALALARAFHPRAPNGGAGALLNGDGESEANSRGVRGDTRRGSVRVGRGSITSLGLPYARLHPRTVEELAA----HAVSSLTSLDLSFCFIGPAGAVALARALDGDGGSSSTGNGTRGRGSRSLRSLKLPHNTVGDTGAHALGRSLSNNR 456
L+ + LDLS + +DLE + +L L + L + D + L+ L+ ++DL N LG A+L +L R + L LE N A TP G RL L A + +L SL VTLDD+ N P A A GG + R+ P +NA+ R R DT ++++LGL ARL T+++L++ SLT+LDLSF FIG AGA ALA AL G L L+LPHN +G G A+ +L +R
Sbjct: 134 LKGLEHLDLSDEPLKAKDLEAAIKRLPRLHRSPRLSLARAGLTDDLARTLQKLLEY-SFIKVDLSSNNLGAIGLAAVLTALPRRASVTELNLEDNQPLASTPLVGERLGNFLMDAYR--YAPNLCSLRVTLDDY------NSPGAAAAAKAKGG--------AKRRGKSP------------LNAVQFVRMLR-------------------------RADTL---------TLSNLGLVGARLSLETIKQLSSLLGERPGQSLTNLDLSFAFIGFAGATALASALRRPG--------------CPLAGLQLPHNGLGSGGTEAICEALLKSR 389 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig9401.20998.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig9401.20998.1 ID=prot_Ecto-sp13_S_contig9401.20998.1|Name=mRNA_Ecto-sp13_S_contig9401.20998.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=738bpback to top |